evolqg

Tools for Evolutionary Quantitative Genetics

https://github.com/lem-usp/evolqg

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
    Found 1 DOI reference(s) in README
  • Academic publication links
    Links to: zenodo.org
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (9.2%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Tools for Evolutionary Quantitative Genetics

Basic Info
Statistics
  • Stars: 10
  • Watchers: 3
  • Forks: 8
  • Open Issues: 10
  • Releases: 2
Created almost 13 years ago · Last pushed 10 months ago
Metadata Files
Readme License

README.md

EvolQG Package

Join the chat at https://gitter.im/diogro/evolqg Travis build status AppVeyor Build Status Coverage Status DOI

Package for evolutionary quantitative genetics, described in Melo D, Garcia G, Hubbe A et al. EvolQG - An R package for evolutionary quantitative genetics [version 1; referees: 1 approved, 1 approved with reservations] F1000Research 2015, 4:925 (doi: 10.12688/f1000research.7082.1) article link

Installation

From CRAN

```R

install.packages("evolqg") ```

From github

In Windows you first need to install Rtools, then proceed to devtools installation instructions. Be careful to use the right version for your R installation.

Using devtools

Install devtools, then:

```R

library(devtools) install_github("lem-usp/evolqg") ```

Troubleshooting

All dependencies should be available from CRAN. Please open an issue if install fails for some reason.

Owner

  • Name: Laboratório de Evolução de Mamíferos - IB USP
  • Login: lem-usp
  • Kind: organization

GitHub Events

Total
  • Issues event: 1
  • Issue comment event: 1
Last Year
  • Issues event: 1
  • Issue comment event: 1

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 521
  • Total Committers: 7
  • Avg Commits per committer: 74.429
  • Development Distribution Score (DDS): 0.061
Past Year
  • Commits: 7
  • Committers: 1
  • Avg Commits per committer: 7.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
diogro d****o@g****m 489
Guilherme w****r@u****r 13
Edgar Z. Alvarenga e****r@y****m 10
FabioLugar m****o@g****m 4
The Gitter Badger b****r@g****m 2
alexhubbe a****e@y****m 2
Edgar Z. Alvarenga e@v****o 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 51
  • Total pull requests: 52
  • Average time to close issues: 6 months
  • Average time to close pull requests: 2 days
  • Total issue authors: 9
  • Total pull request authors: 6
  • Average comments per issue: 1.16
  • Average comments per pull request: 0.13
  • Merged pull requests: 51
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 1
  • Average time to close issues: about 8 hours
  • Average time to close pull requests: less than a minute
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 1.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • diogro (25)
  • alexhubbe (15)
  • drossoni (4)
  • joelmcg (2)
  • RobertBakaric (1)
  • aivuk (1)
  • solomonchak (1)
  • jarioksa (1)
  • wgar84 (1)
Pull Request Authors
  • diogro (44)
  • aivuk (2)
  • MachadoFA (2)
  • alexhubbe (2)
  • gitter-badger (1)
  • wgar84 (1)
Top Labels
Issue Labels
enhancement (9) question (2) bug (2) wontfix (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 474 last-month
  • Total dependent packages: 2
  • Total dependent repositories: 2
  • Total versions: 18
  • Total maintainers: 1
cran.r-project.org: evolqg

Evolutionary Quantitative Genetics

  • Versions: 18
  • Dependent Packages: 2
  • Dependent Repositories: 2
  • Downloads: 474 Last month
Rankings
Forks count: 8.0%
Dependent packages count: 13.6%
Average: 17.5%
Stargazers count: 18.3%
Dependent repos count: 19.2%
Downloads: 28.4%
Maintainers (1)
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.6.0 depends
  • plyr >= 1.7.1 depends
  • MCMCpack * imports
  • Matrix * imports
  • Morpho * imports
  • ape * imports
  • coda * imports
  • expm * imports
  • ggplot2 * imports
  • grDevices * imports
  • graphics * imports
  • igraph * imports
  • methods * imports
  • mvtnorm * imports
  • numDeriv * imports
  • reshape2 * imports
  • stats * imports
  • utils * imports
  • vegan * imports
  • cowplot * suggests
  • doParallel * suggests
  • dplyr * suggests
  • foreach * suggests
  • grid * suggests
  • gridExtra * suggests
  • magrittr * suggests
  • testthat * suggests