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finalfit

Quickly create elegant regression results tables and plots when modelling in R

https://github.com/ewenharrison/finalfit

Science Score: 26.0%

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    Scientific vocabulary similarity
    Low similarity (13.5%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Quickly create elegant regression results tables and plots when modelling in R

Basic Info
  • Host: GitHub
  • Owner: ewenharrison
  • License: other
  • Language: HTML
  • Default Branch: master
  • Homepage: https://finalfit.org/
  • Size: 287 MB
Statistics
  • Stars: 270
  • Watchers: 11
  • Forks: 28
  • Open Issues: 7
  • Releases: 0
Created about 8 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog

README.md

CRAN_Status_Badge CRAN_Status_Badge CRAN_Status_Badge TravisCRAN_Status_Badge Build status Coverage status

finalfit

The finalfit package provides functions that help you quickly create elegant final results tables and plots when modelling in R. These can easily be exported as Word documents, PDFs, or html files.

Its design follows Hadley Wickham's tidy tool manifesto.

In addition, it provides functions for identifying and handling missing data, together with a number of functions to bootstrap simulate regression model results.

Installation

You can install finalfit from CRAN:

r install.packages("finalfit")

It is recommended that this package is used together with dplyr which can be installed via:

r install.packages("dplyr")

Documentation

The package documentation is maintained independently at finalfit.org.

Examples

See Get started and the All tables vignettes for extensive examples.

Crosstable / table 1

``` r

Crosstable

explanatory = c("age.factor", "sex.factor", "obstruct.factor") dependent = 'mort5yr' colons %>% summaryfactorlist(dependent, explanatory, p=TRUE, adddependent_label=TRUE) -> t1 knitr::kable(t1, align=c("l", "l", "r", "r", "r")) ```

Regression table

r explanatory = c("age.factor", "sex.factor", "obstruct.factor", "perfor.factor") dependent = 'mort_5yr' colon_s %>% finalfit(dependent, explanatory, metrics=TRUE) -> t2 knitr::kable(t2[[1]], row.names=FALSE, align=c("l", "l", "r", "r", "r", "r")) knitr::kable(t2[[2]], row.names=FALSE, col.names="")

When exported to PDF:

Regression plots

r explanatory = c("age.factor", "sex.factor", "obstruct.factor", "perfor.factor") dependent = 'mort_5yr' colon_s %>% or_plot(dependent, explanatory)

Owner

  • Login: ewenharrison
  • Kind: user
  • Location: Edinburgh

GitHub Events

Total
  • Issues event: 2
  • Watch event: 6
  • Issue comment event: 1
  • Push event: 2
Last Year
  • Issues event: 2
  • Watch event: 6
  • Issue comment event: 1
  • Push event: 2

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 290
  • Total Committers: 4
  • Avg Commits per committer: 72.5
  • Development Distribution Score (DDS): 0.01
Past Year
  • Commits: 9
  • Committers: 1
  • Avg Commits per committer: 9.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
ewenharrison m****l@e****m 287
TAKAHASHI Kyohei k****t@k****t 1
jric376 j****6 1
marius-mather 6****r 1
Committer Domains (Top 20 + Academic)
kcrt.net: 1 ewenharrison.com: 1

Issues and Pull Requests

Last synced: about 1 year ago

All Time
  • Total issues: 98
  • Total pull requests: 9
  • Average time to close issues: 2 months
  • Average time to close pull requests: about 2 months
  • Total issue authors: 72
  • Total pull request authors: 7
  • Average comments per issue: 2.67
  • Average comments per pull request: 0.67
  • Merged pull requests: 6
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 7
  • Pull requests: 0
  • Average time to close issues: 5 days
  • Average time to close pull requests: N/A
  • Issue authors: 7
  • Pull request authors: 0
  • Average comments per issue: 1.29
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • larmarange (5)
  • LukaszDerylo (4)
  • graemeleehickey (4)
  • shoaibraees (3)
  • Temisesba (3)
  • davidhen (3)
  • adam-mdmph (3)
  • tylcole (2)
  • KMBHPB (2)
  • emmanuels777 (2)
  • billdenney (2)
  • martinschlund (2)
  • gagonzalezm (2)
  • epi-stats (2)
  • sbalci (2)
Pull Request Authors
  • ewenharrison (3)
  • jric376 (1)
  • romainfrancois (1)
  • Nelson-Gon (1)
  • kcrt (1)
  • marius-mather (1)
  • onesandzeroes (1)
Top Labels
Issue Labels
enhancement (7) Add to vignette (4) question (1)
Pull Request Labels
improvement (1)

Packages

  • Total packages: 1
  • Total downloads:
    • cran 2,185 last-month
  • Total docker downloads: 212
  • Total dependent packages: 4
  • Total dependent repositories: 9
  • Total versions: 28
  • Total maintainers: 1
cran.r-project.org: finalfit

Quickly Create Elegant Regression Results Tables and Plots when Modelling

  • Versions: 28
  • Dependent Packages: 4
  • Dependent Repositories: 9
  • Downloads: 2,185 Last month
  • Docker Downloads: 212
Rankings
Stargazers count: 1.6%
Forks count: 2.6%
Downloads: 6.6%
Average: 7.8%
Dependent packages count: 9.3%
Dependent repos count: 9.8%
Docker downloads count: 17.1%
Maintainers (1)
ewen.harrison@ed.ac.uk
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • GGally * imports
  • bdsmatrix * imports
  • boot * imports
  • broom * imports
  • dplyr * imports
  • forcats * imports
  • ggplot2 * imports
  • grid * imports
  • gridExtra * imports
  • lme4 * imports
  • magrittr * imports
  • mice * imports
  • pROC * imports
  • pillar * imports
  • purrr * imports
  • scales * imports
  • stats * imports
  • stringr * imports
  • survival * imports
  • tidyr >= 1.0.0 imports
  • tidyselect * imports
  • cmprsk * suggests
  • coxme * suggests
  • knitr * suggests
  • lmtest * suggests
  • readr * suggests
  • rlang * suggests
  • rmarkdown * suggests
  • rstan * suggests
  • sandwich * suggests
  • survey * suggests
  • survminer * suggests
  • testthat * suggests
  • tibble * suggests