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bayesDP

Tools for the Bayesian Discount Prior Function

https://github.com/graemeleehickey/bayesdp

Science Score: 10.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 5 committers (20.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (16.0%) to scientific vocabulary

Keywords

bayesian bayesian-inference bayesian-statistics clinical-trials mdic posterior-predictive posterior-probability prior-distribution r rstats rstats-package
Last synced: 6 months ago · JSON representation

Repository

Tools for the Bayesian Discount Prior Function

Basic Info
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 2
  • Releases: 0
Topics
bayesian bayesian-inference bayesian-statistics clinical-trials mdic posterior-predictive posterior-probability prior-distribution r rstats rstats-package
Created about 5 years ago · Last pushed about 1 year ago
Metadata Files
Readme License

README.Rmd 

---
output: github_document
---



```{r, echo = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "README-"
)
```

# bayesDP 


[![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/bayesDP)](https://CRAN.R-project.org/package=bayesDP)
[![](https://cranlogs.r-pkg.org/badges/bayesDP)](https://CRAN.R-project.org/package=bayesDP)
[![Downloads](https://cranlogs.r-pkg.org/badges/grand-total/bayesDP?color=brightgreen)](https://www.r-pkg.org:443/pkg/bayesDP)
[![License](https://img.shields.io/badge/license-GPL%20%28%3E=%203%29-brightgreen.svg?style=flat)](https://www.gnu.org/licenses/gpl-3.0.html)
[![R build status](https://github.com/graemeleehickey/bayesDP/workflows/R-CMD-check/badge.svg)](https://github.com/graemeleehickey/bayesDP/actions)
[![R-CMD-check](https://github.com/graemeleehickey/bayesDP/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/graemeleehickey/bayesDP/actions/workflows/R-CMD-check.yaml)
[![Codecov test coverage](https://codecov.io/gh/graemeleehickey/bayesDP/graph/badge.svg)](https://app.codecov.io/gh/graemeleehickey/bayesDP)

 
`bayesDP` provides tools and functions for data augmentation using the Bayesian discount prior function for one arm and two arm clinical trials.

## CRAN Installation

Install release version from CRAN:

```{r, eval=FALSE}
install.packages("bayesDP")
```

## GitHub Installation

Install development version from GitHub:

```{r, eval=FALSE}
devtools::install_github("graemeleehickey/bayesDP")
```

Owner

  • Name: Graeme Hickey
  • Login: graemeleehickey
  • Kind: user
  • Location: Liverpool
  • Company: Medtronic

Senior Director of Statistics | Medtronic Structural Heart & Aortic

GitHub Events

Total
  • Release event: 1
  • Push event: 3
Last Year
  • Release event: 1
  • Push event: 3

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 515
  • Total Committers: 5
  • Avg Commits per committer: 103.0
  • Development Distribution Score (DDS): 0.594
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Shawn Balcome b****s@g****m 209
Donnie M d****e@g****m 150
Shawn Balcome b****2@u****u 114
Graeme Hickey g****y@g****m 38
Shawn Balcome s****e@m****g 4
Committer Domains (Top 20 + Academic)
mdic.org: 1 umn.edu: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 2
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 1
  • Total pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • graemeleehickey (2)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 600 last-month
  • Total docker downloads: 41,971
  • Total dependent packages: 1
  • Total dependent repositories: 1
  • Total versions: 16
  • Total maintainers: 1
cran.r-project.org: bayesDP

Implementation of the Bayesian Discount Prior Approach for Clinical Trials

  • Versions: 16
  • Dependent Packages: 1
  • Dependent Repositories: 1
  • Downloads: 600 Last month
  • Docker Downloads: 41,971
Rankings
Docker downloads count: 0.6%
Dependent packages count: 18.1%
Average: 22.1%
Dependent repos count: 24.0%
Downloads: 27.6%
Forks count: 27.8%
Stargazers count: 34.6%
Maintainers (1)
graemeleehickey@gmail.com
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.6.0 depends
  • ggplot2 * depends
  • methods * depends
  • survival * depends
  • MCMCpack * imports
  • Rcpp * imports
  • covr * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests