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DVHmetrics

Analyze Dose-Volume Histograms and Check Constraints using R

https://github.com/dwoll/dvhmetrics

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 3 committers (33.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.5%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Analyze Dose-Volume Histograms and Check Constraints using R

Basic Info
  • Host: GitHub
  • Owner: dwoll
  • License: gpl-2.0
  • Language: R
  • Default Branch: master
  • Size: 6.8 MB
Statistics
  • Stars: 12
  • Watchers: 3
  • Forks: 5
  • Open Issues: 6
  • Releases: 0
Created over 11 years ago · Last pushed 12 months ago
Metadata Files
Readme License

README.md

DVHmetrics

Analyze Dose-Volume Histograms and Check Constraints using R

DVHmetrics provides functionality for the analysis of dose-volume histograms in radiation oncology:

  • Read dose-volume-histogram (DVH) text files
  • Calculate arbitrary DVH metrics, show DVH diagrams
  • Calculate gEUD, BED, convert DVH doses to EQD2
  • Calculate TCP and NTCP according to LKB (Lyman probit), Niemierko logit, or Kaellman Poisson (relative seriality) model
  • Check and visualize quality assurance constraints for the DVH
  • Includes a shiny-based web application for most of the functionality - also available online at shiny.imbei.uni-mainz.de:3838/DVHmetrics/.
  • For further explanations and an example walkthrough, see the package vignette

Owner

  • Name: Daniel Wollschlaeger
  • Login: dwoll
  • Kind: user

GitHub Events

Total
  • Issues event: 3
  • Watch event: 1
  • Issue comment event: 9
  • Push event: 3
Last Year
  • Issues event: 3
  • Watch event: 1
  • Issue comment event: 9
  • Push event: 3

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 178
  • Total Committers: 3
  • Avg Commits per committer: 59.333
  • Development Distribution Score (DDS): 0.449
Past Year
  • Commits: 10
  • Committers: 1
  • Avg Commits per committer: 10.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Daniel Wollschlaeger d****r@g****m 98
Daniel Wollschlaeger d****l@k****g 42
Wollschlaeger d****h@U****E 38
Committer Domains (Top 20 + Academic)
uni-mainz.de: 1 kuci.org: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 19
  • Total pull requests: 0
  • Average time to close issues: 4 months
  • Average time to close pull requests: N/A
  • Total issue authors: 15
  • Total pull request authors: 0
  • Average comments per issue: 4.47
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 0
  • Average time to close issues: 3 days
  • Average time to close pull requests: N/A
  • Issue authors: 3
  • Pull request authors: 0
  • Average comments per issue: 2.67
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • mosaiyeb (3)
  • rhj1993119 (2)
  • romasg (1)
  • sometune (1)
  • H53-OOF (1)
  • Trinhhuyvu (1)
  • revoletch (1)
  • sudo-bluee (1)
  • allanhummer (1)
  • meddridi (1)
  • stephan1312 (1)
  • zx8754 (1)
  • MelAMcIntyre (1)
  • marmo2 (1)
  • robmarkcole (1)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 411 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 15
  • Total maintainers: 1
cran.r-project.org: DVHmetrics

Analyze Dose-Volume Histograms and Check Constraints

  • Versions: 15
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 411 Last month
Rankings
Forks count: 11.3%
Stargazers count: 19.8%
Average: 26.0%
Dependent packages count: 29.8%
Downloads: 33.5%
Dependent repos count: 35.5%
Maintainers (1)
wollschlaeger@uni-mainz.de
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.2 depends
  • DT * imports
  • KernSmooth * imports
  • ggplot2 * imports
  • grid * imports
  • reshape2 * imports
  • shiny * imports
  • stats * imports
  • utils * imports
  • bs4Dash * suggests
  • knitr * suggests
  • markdown * suggests