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geomorph

Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-3-dimensions as well as 3D surfaces in the R statistical computing environment. This repository is dedicated to providing stable and beta versions between CRAN uploads

https://github.com/geomorphr/geomorph

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 7 committers (14.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.5%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-3-dimensions as well as 3D surfaces in the R statistical computing environment. This repository is dedicated to providing stable and beta versions between CRAN uploads

Basic Info
  • Host: GitHub
  • Owner: geomorphR
  • Language: R
  • Default Branch: Stable
  • Homepage:
  • Size: 13.5 MB
Statistics
  • Stars: 79
  • Watchers: 18
  • Forks: 25
  • Open Issues: 1
  • Releases: 0
Created over 11 years ago · Last pushed about 1 year ago
Metadata Files
Readme Changelog

README.md

geomorph

Geomorph is a software package for performing all stages of geometric morphometric shape analysis of 2- and 3-dimensional landmark points, as well as semilandmarks on curves and surfaces, in the R statistical computing environment. This repository is dedicated to providing beta versions between CRAN uploads.

To install the current geomorph R-package from CRAN:

Within R:

install.packages("geomorph")

For Mac users: please also install XQuartz from https://www.xquartz.org/. This allows the library(rgl) to function.

To install the current version of geomorph R-package from Github using devtools:

Within R:

install.packages("devtools")

devtools::installgithub("geomorphR/geomorph", ref = "Stable", buildvignettes = TRUE)

This installs a stable release of the current version of geomorph on CRAN, allowing us to quickly fix errors that slip thorough the cracks and are uploaded with the CRAN version.

Owner

  • Name: geomorph R package
  • Login: geomorphR
  • Kind: organization
  • Location: Worldwide

Geomorph is a software package for performing all stages of geometric morphometric shape analysis in the R statistical computing environment

GitHub Events

Total
  • Issues event: 10
  • Watch event: 3
  • Issue comment event: 21
  • Push event: 76
  • Pull request event: 2
  • Fork event: 5
Last Year
  • Issues event: 10
  • Watch event: 3
  • Issue comment event: 21
  • Push event: 76
  • Pull request event: 2
  • Fork event: 5

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 1,200
  • Total Committers: 7
  • Avg Commits per committer: 171.429
  • Development Distribution Score (DDS): 0.517
Past Year
  • Commits: 46
  • Committers: 3
  • Avg Commits per committer: 15.333
  • Development Distribution Score (DDS): 0.283
Top Committers
Name Email Commits
Michael Collyer m****r@g****m 580
deanadams d****s@i****u 313
EmSherratt e****t@g****m 243
Emma Sherratt E****t 35
Antigoni Kaliontzopoulou a****i@c****t 26
Erica Baken e****n@g****m 2
Duncan Murdoch m****n@g****m 1
Committer Domains (Top 20 + Academic)
cibio.up.pt: 1 iastate.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 49
  • Total pull requests: 8
  • Average time to close issues: 4 months
  • Average time to close pull requests: 18 days
  • Total issue authors: 39
  • Total pull request authors: 7
  • Average comments per issue: 3.51
  • Average comments per pull request: 0.88
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 5
  • Pull requests: 3
  • Average time to close issues: 12 days
  • Average time to close pull requests: about 22 hours
  • Issue authors: 5
  • Pull request authors: 3
  • Average comments per issue: 4.4
  • Average comments per pull request: 1.67
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • aConar (4)
  • sjm5467 (2)
  • StanleeKol (2)
  • JohnSal1 (2)
  • kmiddleton (2)
  • PhilGossieaux (2)
  • j-a-thia (2)
  • bernard-liew (2)
  • miltontan (1)
  • ENewham (1)
  • CarlyMuletzWolz (1)
  • lizandropf (1)
  • dartcesan (1)
  • rachsglee23 (1)
  • apwoodbailey (1)
Pull Request Authors
  • mdpillet (2)
  • rgriff23 (2)
  • Ferne-Kotlyar (2)
  • butterflyology (1)
  • dokato (1)
  • frederic-santos (1)
  • dmurdoch (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 1,876 last-month
  • Total docker downloads: 43,404
  • Total dependent packages: 11
  • Total dependent repositories: 17
  • Total versions: 47
  • Total maintainers: 1
cran.r-project.org: geomorph

Geometric Morphometric Analyses of 2D and 3D Landmark Data

  • Versions: 47
  • Dependent Packages: 11
  • Dependent Repositories: 17
  • Downloads: 1,876 Last month
  • Docker Downloads: 43,404
Rankings
Docker downloads count: 0.6%
Forks count: 3.8%
Dependent packages count: 5.0%
Average: 5.0%
Stargazers count: 5.0%
Dependent repos count: 6.9%
Downloads: 8.8%
Maintainers (1)
dcadams@iastate.edu
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • Matrix * depends
  • R >= 3.5.0 depends
  • RRPP >= 1.0.0 depends
  • rgl * depends
  • ape * imports
  • ggplot2 * imports
  • grDevices * imports
  • graphics * imports
  • jpeg * imports
  • parallel * imports
  • stats * imports
  • utils * imports
  • dplyr * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests