RUVSeq
Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the official development version.
Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
2 of 11 committers (18.2%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (9.7%) to scientific vocabulary
Keywords from Contributors
Repository
Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the official development version.
Basic Info
- Host: GitHub
- Owner: drisso
- Language: R
- Default Branch: master
- Size: 57.6 KB
Statistics
- Stars: 14
- Watchers: 2
- Forks: 3
- Open Issues: 7
- Releases: 0
Metadata Files
README.md
R package: RUVSeq
This is the developer version of the Bioconductor package RUVSeq. Install in R as:
r
install.packages("BiocManager")
BiocManager::install("RUVSeq")
Status
- Bioc-release
- Bioc-devel:
- Travis CI:
Issues and bug reports
Please use https://github.com/drisso/RUVSeq/issues to submit issues, bug reports, and comments.
Owner
- Name: Davide Risso
- Login: drisso
- Kind: user
- Location: New York, NY
- Company: Weill Cornell Medicine
- Website: drisso.github.io
- Repositories: 23
- Profile: https://github.com/drisso
GitHub Events
Total
- Issues event: 1
- Watch event: 2
- Issue comment event: 1
- Fork event: 1
Last Year
- Issues event: 1
- Watch event: 2
- Issue comment event: 1
- Fork event: 1
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Davide Risso | r****e@g****m | 25 |
| Nitesh Turaga | n****a@g****m | 14 |
| Dan Tenenbaum | d****a@f****g | 10 |
| Herve Pages | h****s@f****g | 4 |
| Hervé Pagès | h****s@f****g | 2 |
| J Wokaty | j****y@s****u | 2 |
| vobencha | v****n@r****g | 2 |
| vobencha | v****a@g****m | 2 |
| Davide Risso | d****2@m****u | 1 |
| Kayla-Morrell | k****l@r****g | 1 |
| Marc Carlson | m****n@f****g | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 15
- Total pull requests: 0
- Average time to close issues: 3 months
- Average time to close pull requests: N/A
- Total issue authors: 14
- Total pull request authors: 0
- Average comments per issue: 1.33
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 2
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 2
- Pull request authors: 0
- Average comments per issue: 0.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- lizhaozhi (2)
- fatyang799 (1)
- gianfilippo (1)
- mariana19901990 (1)
- beginner984 (1)
- symbiologist (1)
- devenderarora (1)
- dzjfeel (1)
- malonzm1 (1)
- lucolotto (1)
- ahorvath (1)
- zhouqz (1)
- LouellaVasquez33 (1)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- bioconductor 164,920 total
- Total dependent packages: 7
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 1
bioconductor.org: RUVSeq
Remove Unwanted Variation from RNA-Seq Data
- Homepage: https://github.com/drisso/RUVSeq
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/RUVSeq/inst/doc/RUVSeq.pdf
- License: Artistic-2.0
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Latest release: 1.42.0
published over 1 year ago
Rankings
Maintainers (1)
Dependencies
- Biobase * depends
- EDASeq >= 1.99.1 depends
- edgeR * depends
- MASS * imports
- methods * imports
- BiocStyle * suggests
- DESeq2 * suggests
- RColorBrewer * suggests
- knitr * suggests
- zebrafishRNASeq * suggests