scico

Palettes for R based on the Scientific Colour-Maps

https://github.com/thomasp85/scico

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
○
.zenodo.json file
✓
DOI references
Found 2 DOI reference(s) in README
○
Academic publication links
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Committers with academic emails
1 of 5 committers (20.0%) from academic institutions
○
Institutional organization owner
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JOSS paper metadata
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Scientific vocabulary similarity
Low similarity (17.7%) to scientific vocabulary

Keywords

color-palette rstats visualization

Last synced: 10 months ago · JSON representation

Repository

Palettes for R based on the Scientific Colour-Maps

Basic Info

Host: GitHub
Owner: thomasp85
License: other
Language: R
Default Branch: main
Size: 2.19 MB

Statistics

Stars: 454
Watchers: 7
Forks: 24
Open Issues: 4
Releases: 5

Topics

color-palette rstats visualization

Created about 8 years ago · Last pushed over 2 years ago

Metadata Files

Readme License

README.Rmd

---
output: github_document
---



```{r, echo = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-"
)
```

# scico 


[![R-CMD-check](https://github.com/thomasp85/scico/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/thomasp85/scico/actions/workflows/R-CMD-check.yaml)
[![CRAN_Release_Badge](http://www.r-pkg.org/badges/version-ago/scico)](https://CRAN.R-project.org/package=scico)
[![Codecov test coverage](https://codecov.io/gh/thomasp85/scico/branch/main/graph/badge.svg)](https://app.codecov.io/gh/thomasp85/scico?branch=main)


This is a small package to provide access to the colour palettes developed by
Fabio Crameri and published at . It
uses more or less the same api as 
[`viridis`](https://github.com/sjmgarnier/viridis) and provides scales for 
[`ggplot2`](https://github.com/tidyverse/ggplot2) without requiring `ggplot2` to
be installed.

## Installation
`scico` can be installed from CRAN with `install.packages('scico')`. If you want
the development version then install directly from GitHub:

```{r, eval=FALSE}
# install.packages("devtools")
devtools::install_github("thomasp85/scico")
```

## Palettes
`scico` provides 39 different palettes, all of which are perceptually uniform 
and colourblind safe. An overview can be had with the `scico_palette_show()`
function:

```{r}
library(scico)

scico_palette_show()
```

Once you've decided on a palette you can generate colour values using the 
`scico()` function:

```{r}
scico(30, palette = 'lapaz')
```

## ggplot2 support
`scico` provides relevant scales for use with `ggplot2`. It only suggests 
`ggplot2` in order to stay lightweight, but if `ggplot2` is available you'll 
have access to the `scale_[colour|fill]_scico()` functions:

```{r, message=FALSE}
library(ggplot2)
volcano <- data.frame(
  x = rep(seq_len(ncol(volcano)), each = nrow(volcano)),
  y = rep(seq_len(nrow(volcano)), ncol(volcano)),
  height = as.vector(volcano)
)
ggplot(volcano, aes(x = x, y = y, fill = height)) + 
  geom_raster() + 
  scale_fill_scico(palette = 'davos') 
```

## References
- Crameri, Fabio. (2018, May 8). *Scientific colour maps (Version 3.0.1)*. Zenodo. doi: 10.5281/zenodo.1243909
- Crameri, Fabio. (2018). *Geodynamic diagnostics, scientific visualisation and StagLab 3.0*. Geosci. Model Dev. Discuss. doi: 10.5194/gmd-2017-328

Owner

Name: Thomas Lin Pedersen
Login: thomasp85
Kind: user
Location: Copenhagen
Company: @posit-pbc, part of @tidyverse team

Website: www.data-imaginist.com
Twitter: thomasp85
Repositories: 121
Profile: https://github.com/thomasp85

Maker of tools focusing on data science and data visualisation

GitHub Events

Total

Watch event: 44
Issue comment event: 1

Last Year

Watch event: 44
Issue comment event: 1

Committers

Last synced: about 1 year ago

All Time

Total Commits: 47
Total Committers: 5
Avg Commits per committer: 9.4
Development Distribution Score (DDS): 0.149

Past Year

Commits: 0
Committers: 0
Avg Commits per committer: 0.0
Development Distribution Score (DDS): 0.0

Top Committers

Name	Email	Commits
Thomas Lin Pedersen	t**5@g**m	40
Thomas Lin Pedersen	w**6@z**l	3
Michael Grund	2****d	2
Michael Clark	m**l@u**u	1
Fernando Campos	c**a@g**m	1

Committer Domains (Top 20 + Academic)

umich.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time

Total issues: 14
Total pull requests: 8
Average time to close issues: 7 months
Average time to close pull requests: 4 months
Total issue authors: 10
Total pull request authors: 6
Average comments per issue: 1.29
Average comments per pull request: 1.25
Merged pull requests: 4
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 0
Pull requests: 0
Average time to close issues: N/A
Average time to close pull requests: N/A
Issue authors: 0
Pull request authors: 0
Average comments per issue: 0
Average comments per pull request: 0
Merged pull requests: 0
Bot issues: 0
Bot pull requests: 0

View more stats

Top Authors

Issue Authors

andrewheiss (2)
nlubock (2)
thomasp85 (2)
jens-daniel-mueller (2)
dyl4nm4rsh4ll (1)
modche (1)
ptompalski (1)
LDalby (1)
wiw4002 (1)
hinojojojo (1)

Pull Request Authors

michaelgrund (3)
m-clark (1)
julou (1)
EmilHvitfeldt (1)
camposfa (1)
jmlondon (1)

Top Labels

Issue Labels

Pull Request Labels

Packages

Total packages: 3
Total downloads:
- cran 4,299 last-month
Total docker downloads: 2,103

Total dependent packages: 6
(may contain duplicates)
Total dependent repositories: 57
(may contain duplicates)
Total versions: 17
Total maintainers: 1

proxy.golang.org: github.com/thomasp85/scico

Documentation: https://pkg.go.dev/github.com/thomasp85/scico#section-documentation
License: other
Latest release: v1.5.0
published almost 3 years ago

Versions: 5
Dependent Packages: 0
Dependent Repositories: 0

Rankings

Dependent packages count: 6.5%

Average: 6.7%

Dependent repos count: 6.9%

Last synced: 10 months ago

cran.r-project.org: scico

Colour Palettes Based on the Scientific Colour-Maps

Homepage: https://github.com/thomasp85/scico
Documentation: http://cran.r-project.org/web/packages/scico/scico.pdf
License: MIT + file LICENSE
Latest release: 1.5.0
published almost 3 years ago

Versions: 7
Dependent Packages: 5
Dependent Repositories: 57
Downloads: 4,299 Last month
Docker Downloads: 2,103

Rankings

Stargazers count: 0.9%

Dependent repos count: 3.2%

Forks count: 3.6%

Downloads: 6.5%

Dependent packages count: 8.2%

Average: 8.3%

Docker downloads count: 27.4%

Maintainers (1)

thomasp85@gmail.com

Last synced: 10 months ago

conda-forge.org: r-scico

Homepage: https://github.com/thomasp85/scico
License: MIT
Latest release: 1.3.1
published almost 4 years ago

Versions: 5
Dependent Packages: 1
Dependent Repositories: 0

Rankings

Stargazers count: 19.7%

Dependent packages count: 28.8%

Average: 29.7%

Dependent repos count: 34.0%

Forks count: 36.1%

Last synced: 10 months ago

Dependencies

DESCRIPTION cran

R >= 2.10 depends
grDevices * imports
scales * imports
covr * suggests
dplyr * suggests
ggplot2 * suggests
testthat * suggests