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simcross

R package to simulate and plot general experimental crosses

https://github.com/kbroman/simcross

Science Score: 46.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 4 committers (25.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.4%) to scientific vocabulary
Last synced: 7 months ago · JSON representation

Repository

R package to simulate and plot general experimental crosses

Basic Info
Statistics
  • Stars: 6
  • Watchers: 2
  • Forks: 5
  • Open Issues: 4
  • Releases: 3
Created almost 12 years ago · Last pushed about 1 year ago
Metadata Files
Readme Changelog License

README.md

R/simcross

R-CMD-check CRAN_Status_Badge zenodo DOI

Karl W Broman

R/simcross is an R package for simulating and plotting general experimental crosses.

Installation

You can install R/simcross from CRAN:

r install.packages("simcross")

Vignette

A vignette describing the use of the package is available from within R (and also here). Load the package and then use the vignette function.

r library(simcross) vignette("simcross", package="simcross")

License

This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License, version 3, as published by the Free Software Foundation.

This program is distributed in the hope that it will be useful, but without any warranty; without even the implied warranty of merchantability or fitness for a particular purpose. See the GNU General Public License for more details.

A copy of the GNU General Public License, version 3, is available at https://www.r-project.org/Licenses/GPL-3

Owner

  • Name: Karl Broman
  • Login: kbroman
  • Kind: user
  • Location: Madison, Wisconsin, USA
  • Company: University of Wisconsin-Madison

Professor in Dept of Biostatistics & Medical Informatics at UW–Madison. Applied statistician working on statistical genomics.

GitHub Events

Total
  • Issues event: 1
  • Push event: 1
Last Year
  • Issues event: 1
  • Push event: 1

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 268
  • Total Committers: 4
  • Avg Commits per committer: 67.0
  • Development Distribution Score (DDS): 0.075
Past Year
  • Commits: 5
  • Committers: 1
  • Avg Commits per committer: 5.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Karl Broman k****n@g****m 248
Jianan Tian j****7@g****m 13
Karl Broman k****n@b****u 6
dominik d****4@y****e 1
Committer Domains (Top 20 + Academic)
yahoo.de: 1 biostat.wisc.edu: 1

Issues and Pull Requests

Last synced: 8 months ago

All Time
  • Total issues: 11
  • Total pull requests: 5
  • Average time to close issues: 3 days
  • Average time to close pull requests: about 10 hours
  • Total issue authors: 3
  • Total pull request authors: 2
  • Average comments per issue: 0.73
  • Average comments per pull request: 0.6
  • Merged pull requests: 5
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • kbroman (8)
  • Zpengfei3236 (2)
  • mstetter (1)
Pull Request Authors
  • jianan (4)
  • DominikMueller64 (1)
Top Labels
Issue Labels
enhancement (3) bug (2) documentation (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 242 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 2
  • Total versions: 2
  • Total maintainers: 1
cran.r-project.org: simcross

Simulate Experimental Crosses

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 2
  • Downloads: 242 Last month
Rankings
Forks count: 10.8%
Dependent repos count: 19.2%
Stargazers count: 20.6%
Dependent packages count: 28.7%
Average: 31.3%
Downloads: 77.3%
Maintainers (1)
broman@wisc.edu
Last synced: 8 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.1.0 depends
  • Rcpp >= 0.12.17 imports
  • graphics * imports
  • stats * imports
  • devtools * suggests
  • knitr * suggests
  • qtl * suggests
  • rmarkdown * suggests
  • roxygen2 * suggests
  • testthat * suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v3 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite