NADA2

Non-detects And Data Analysis

https://github.com/swampthingpaul/nada2

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (12.1%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Non-detects And Data Analysis

Basic Info
  • Host: GitHub
  • Owner: SwampThingPaul
  • License: other
  • Language: R
  • Default Branch: master
  • Size: 20.5 MB
Statistics
  • Stars: 19
  • Watchers: 4
  • Forks: 8
  • Open Issues: 1
  • Releases: 9
Created about 6 years ago · Last pushed 11 months ago
Metadata Files
Readme Changelog License

README.md

NADA2

Table of Contents

Introduction

For many environmental professionals, the way to deal with “nondetects” is less than obvious. Values below detection or reporting limits result from measuring trace amounts of a variety of organic and inorganic chemicals. This package includes methods for plotting, computing summary statistics, hypothesis tests, and regression models for data with one or more detection limits. Most are adaptations of or direct use of existing methods found in survival analysis (such as in the survival package) and in cancer research (such as in the interval package).

This package is a series of new procedures or improvements on current ones in the NADA package developed through a series of webinars, online courses, and updates to Helsel (2004) and Helsel (2011).

  • Helsel, D.R., 2004. Nondetects and Data Analysis: Statistics for Censored Environmental Data, 1st edition. ed. Wiley-Interscience, Hoboken, N.J.
  • Helsel, D.R., 2011. Statistics for Censored Environmental Data Using Minitab© and R, 2nd edition. ed. Wiley-Interscience, Hoboken, N.J.

Citing package

r citation('NADA2')

## 
## To cite package 'NADA2' in publications use:
## 
##   Paul Julian and Dennis Helsel (2021). NADA2: Data Analysis for
##   Censored Environmental Data. R package version 1.0.2.
##   https://github.com/SwampThingPaul/NADA2
## 
## A BibTeX entry for LaTeX users is
## 
##   @Manual{,
##     title = {NADA2: Data Analysis for Censored Environmental Data},
##     author = {Paul Julian and Dennis Helsel},
##     year = {2021},
##     note = {R package version 1.0.2},
##     url = {https://github.com/SwampThingPaul/NADA2},
##   }

Installation

Development version can be installed from this repo using:

r install.packages("devtools");# if you do not have it installed on your PC devtools::install_github("SwampThingPaul/NADA2")

To install the deployed version from CRAN use:

r install.packages("NADA2")


Owner

  • Name: Paul Julian
  • Login: SwampThingPaul
  • Kind: user
  • Location: Fort Myers, Florida, USA

I am an aquatic ecologist and biogeochemist interested in soil and water interactions, ecohydrology, climate change, sea-level rise, and statistics.

GitHub Events

Total
  • Create event: 1
  • Release event: 1
  • Issues event: 3
  • Watch event: 3
  • Issue comment event: 6
  • Push event: 5
  • Pull request event: 1
  • Fork event: 1
Last Year
  • Create event: 1
  • Release event: 1
  • Issues event: 3
  • Watch event: 3
  • Issue comment event: 6
  • Push event: 5
  • Pull request event: 1
  • Fork event: 1

Committers

Last synced: over 3 years ago

All Time
  • Total Commits: 75
  • Total Committers: 4
  • Avg Commits per committer: 18.75
  • Development Distribution Score (DDS): 0.52
Top Committers
Name Email Commits
Paul Julian S****l@u****m 36
Paul Julian 3****l@u****m 34
practicalstats 6****s@u****m 4
practicalstats d****l@p****m 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 12 months ago

All Time
  • Total issues: 10
  • Total pull requests: 6
  • Average time to close issues: 5 months
  • Average time to close pull requests: about 1 month
  • Total issue authors: 9
  • Total pull request authors: 4
  • Average comments per issue: 1.7
  • Average comments per pull request: 0.17
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 5
  • Pull requests: 1
  • Average time to close issues: 4 months
  • Average time to close pull requests: 11 days
  • Issue authors: 5
  • Pull request authors: 1
  • Average comments per issue: 2.8
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • MoREpro (2)
  • jgonzalez2002 (1)
  • rpouillot (1)
  • YoJimboDurant (1)
  • mps9506 (1)
  • SwampThingPaul (1)
  • dlhask (1)
  • alexkowa (1)
  • lukefullard (1)
Pull Request Authors
  • alexkowa (3)
  • SwampThingPaul (2)
  • williamlai2 (2)
  • YoJimboDurant (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 306 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 11
  • Total maintainers: 1
cran.r-project.org: NADA2

Data Analysis for Censored Environmental Data

  • Versions: 11
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 306 Last month
Rankings
Forks count: 10.9%
Stargazers count: 15.9%
Average: 21.1%
Dependent repos count: 24.2%
Downloads: 25.5%
Dependent packages count: 29.0%
Maintainers (1)
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • EnvStats >= 2.4 depends
  • R >= 3.6 depends
  • Kendall * imports
  • NADA * imports
  • cenGAM * imports
  • coin * imports
  • fitdistrplus * imports
  • grDevices * imports
  • graphics * imports
  • mgcv * imports
  • multcomp * imports
  • perm * imports
  • stats * imports
  • survival * imports
  • survminer * imports
  • utils * imports
  • vegan * imports
  • knitr * suggests
  • rmarkdown * suggests