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rTRIPLEXCWFlux

A carbon-water coupled model integrates soil water and vapor pressure deficits into the stomatal conductance submodel to estimate net ecosystem production and evapotranspiration in forest ecosystems

https://github.com/shulansun/rtriplex_cw_flux

Science Score: 13.0%

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    Found 4 DOI reference(s) in README
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Repository

A carbon-water coupled model integrates soil water and vapor pressure deficits into the stomatal conductance submodel to estimate net ecosystem production and evapotranspiration in forest ecosystems

Basic Info
  • Host: GitHub
  • Owner: ShulanSun
  • License: other
  • Language: R
  • Default Branch: main
  • Size: 22.9 MB
Statistics
  • Stars: 3
  • Watchers: 2
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 3 years ago · Last pushed over 3 years ago
Metadata Files
Readme License

README.md

rTRIPLEXCWFlux

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Purpose

The rTRIPLEXCWFlux package encodes the carbon uptake submodule and evapotranspiration submodule of the TRIPLEX-CW-Flux model to run the simulation of carbon-water coupling. TRIPLEX-CW-Flux model is based on two well-established models, TRIPLEX-Flux model (Zhou et al., 2008) and Penman–Monteith model (Monteith, 1965). In the R script, the user only needs to download and load the rTRIPLEX-CW-Flux package, and then input the variables and parameters of the model to obtain simulated results. This package accelerates the running speed of the model and facilitates the estimation of carbon sequestration and water consumption in different forest ecosystems using extensive flux observed data.This could make TRIPLEX-CW-Flux model free available and more popular in future study.

Installation

You can install the development version of rTRIPLEXCWFlux from GitHub with:

``` r

install.packages("devtools")

devtools::installgithub(repo="ShulanSun/rTRIPLEXCW_Flux") ```

Usage

This is a basic example which shows you how to run the package. In this example, we run a simulation for a Chinese fir plantation. The input data are provided as internal data in rTRIPLEXCWFlux. The outputs of the TRIPLEX_CW_Flux function are a long format dataframe and charts of simulated result for net ecosystem productivity (NEP) and evapotranspiration (ET) at 30 min scale, and monthly variation of the input environmental factors.

``` r library(rTRIPLEXCWFlux) out<-TRIPLEXCWFlux (Inputvariable=Inputvariable, Inputparameter=Inputpara, overyear = TRUE) head(out)

basic example code

```

Author

Shulan Sun, Wenhua Xiang, Shuai Ouyang, Xiaolu Zhou, Changhui Peng

References

Evaporation and Environment. Symposia of the Society for Experimental Biology, 19, 205-234. https://www.semanticscholar.org/paper/Evaporation-and-environment.-Monteith

Zhou, X.L., Peng, C.H., Dang, Q.L., Sun, J.F., Wu, H.B., &Hua, D. (2008). Simulating carbon exchange in Canadian Boreal forests: I. Model structure, validation, and sensitivity analysis. Ecological Modelling,219(3-4), 287-299. https://doi.org/10.1016/j.ecolmodel.2008.07.011

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Packages

  • Total packages: 1
  • Total downloads:
    • cran 217 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 2
  • Total maintainers: 1
cran.r-project.org: rTRIPLEXCWFlux

Carbon-Water Coupled Model

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 217 Last month
Rankings
Forks count: 28.8%
Dependent packages count: 29.8%
Stargazers count: 35.2%
Dependent repos count: 35.5%
Average: 41.9%
Downloads: 80.4%
Maintainers (1)
sslhhxx@163.com
Last synced: 10 months ago

Dependencies

.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v2 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • R >= 2.10 depends
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests