crossnma
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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✓DOI references
Found 10 DOI reference(s) in README -
○Academic publication links
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✓Committers with academic emails
4 of 8 committers (50.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (12.6%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: htx-r
- Language: R
- Default Branch: main
- Size: 2.42 MB
Statistics
- Stars: 1
- Watchers: 0
- Forks: 2
- Open Issues: 1
- Releases: 0
Metadata Files
README.md
crossnma: Cross-Design and Cross-Format Synthesis using Network Meta-Analysis and Network Meta-Regression
Official Git repository of R package crossnma
Authors
Tasnim Hamza, Guido Schwarzer, Georgia Salanti
Description
crossnma is an R package that allows for synthesizing the data from randomized or non-randomized studies coming from individual-participants or aggregate data (Hamza et al., 2023). The package implements Bayesian models in network meta-analysis and network meta-regression through JAGS software (Hamza et al., 2024).
Installation
Current stable 
release:
r
install.packages("crossnma")
Current beta / GitHub release:
Installation using R package
remotes:
r
install.packages("remotes")
remotes::install_github("htx-r/crossnma")
How to use crossnma?
There are two steps to conduct a network meta-analysis or
meta-regression. The first step is to create a JAGS model using
crossnma.model() which produces the JAGS code and transforms the
data to the JAGS format. In the second step, the output of that
function will be used in crossnma() to run the MCMC (Markov chain
Monte Carlo) through JAGS.
We illustrate how to use crossnma through several examples in the vignette:
vignette("crossnma")
How to cite crossnma?
A BibTeX entry for LaTeX users is provided by
citation(package = "crossnma")
Bug Reports:
r
bug.report(package = "crossnma")
The bug.report function is not supported in RStudio. Please send an email to Tasnim Hamza hamza.a.tasnim@gmail.com if you use RStudio.
You can also report bugs on GitHub under Issues.
References
Owner
- Name: HTx R software
- Login: htx-r
- Kind: organization
- Repositories: 7
- Profile: https://github.com/htx-r
GitHub Events
Total
- Push event: 5
- Pull request event: 2
- Pull request review event: 1
Last Year
- Push event: 5
- Pull request event: 2
- Pull request review event: 1
Committers
Last synced: over 3 years ago
All Time
- Total Commits: 100
- Total Committers: 8
- Avg Commits per committer: 12.5
- Development Distribution Score (DDS): 0.59
Top Committers
| Name | Commits | |
|---|---|---|
| TasnimHamza | t****a@i****h | 41 |
| Tasnim | t****3@A****l | 39 |
| Guido Schwarzer | sc@i****e | 9 |
| Tasnim | t****3@e****h | 3 |
| Tasnim | t****3@e****h | 3 |
| TasnimHamza | 3****a@u****m | 2 |
| Guido Schwarzer | g****r@u****e | 2 |
| Tasnim | t****3@e****h | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 1
- Total pull requests: 14
- Average time to close issues: about 2 months
- Average time to close pull requests: about 2 months
- Total issue authors: 1
- Total pull request authors: 2
- Average comments per issue: 1.0
- Average comments per pull request: 0.0
- Merged pull requests: 12
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 3
- Average time to close issues: N/A
- Average time to close pull requests: 1 day
- Issue authors: 0
- Pull request authors: 1
- Average comments per issue: 0
- Average comments per pull request: 0.0
- Merged pull requests: 2
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- zhui126 (1)
Pull Request Authors
- guido-s (13)
- TasnimHamza (2)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- cran 1,560 last-month
- Total docker downloads: 21,613
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 4
- Total maintainers: 1
cran.r-project.org: crossnma
Cross-Design & Cross-Format Network Meta-Analysis and Regression
- Homepage: https://github.com/htx-r/crossnma
- Documentation: http://cran.r-project.org/web/packages/crossnma/crossnma.pdf
- License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
-
Latest release: 1.3.0
published over 1 year ago
Rankings
Maintainers (1)
Dependencies
- R >= 3.5 depends
- netmeta * depends
- coda >= 0.19 imports
- devtools * imports
- dplyr >= 1.0.2 imports
- ggplot2 >= 3.3.2 imports
- magrittr >= 2.0.1 imports
- plyr >= 1.8.6 imports
- rjags >= 4 imports
- rlang >= 0.4.11 imports
- tidyr >= 1.1.2 imports
- knitr * suggests
- rmarkdown * suggests