admiralmetabolic
Metabolic package extension of admiral
Science Score: 26.0%
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○Scientific vocabulary similarity
Low similarity (17.1%) to scientific vocabulary
Repository
Metabolic package extension of admiral
Basic Info
- Host: GitHub
- Owner: pharmaverse
- License: apache-2.0
- Language: R
- Default Branch: main
- Homepage: https://pharmaverse.github.io/admiralmetabolic/
- Size: 5.36 MB
Statistics
- Stars: 8
- Watchers: 2
- Forks: 6
- Open Issues: 10
- Releases: 2
Metadata Files
README.md
admiralmetabolic 
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Metabolism extension package for ADaM in R Asset Library {admiral}
Purpose
To provide a complementary (to {admiral}) toolbox that enables users
to develop specifics for metabolic clinical trials.
Installation
The package is available from CRAN and can be installed with:
r
install.packages("admiralmetabolic")
To install the latest development version of the package directly from GitHub use the following code:
r
install.packages("pak")
pak::pkg_install("admiralmetabolic", dependencies = TRUE)
Dependencies
The latest version of the package works with the latest versions of the
packages stated in DESCRIPTION.
If a previous version of the package should be used, it is recommended
to use latest version of the dependencies at the point of time when the
previous version of {admiralmetabolic} was released.
Scope
- Build a toolbox of re-usable functions and utilities to create metabolism-specific ADaM datasets in R in a modular manner.
- All functions are created based upon the ADaM Implementation Guide and aim to facilitate the programming of ADaM dataset standards.
- Initially the package will focus on the obesity therapeutic area.
Expectations
{admiralmetabolic} is expected to complement {admiral} and provide
functions to help with the creation of analyses required
for metabolic trial ADaMs.
References and Documentation
- Please refer to the References and Documentation
R Versions
Here's a summary of our strategy for this package related to R versions:
- R versions for developers and users will follow the same as
{admiral}core package. - For development the
mainbranch of{admiral}core is used as a dependency. For releasing a new{admiralmetabolic}version it must run using the latest released{admiral}core version.
Contact
We use the following for support and communications between user and developer community:
- Slack - for informal discussions, Q&A and building our user community. If you don't have access, use this link to join the pharmaverse Slack workspace
- GitHub Issues - for direct feedback, enhancement requests or raising bugs
Owner
- Name: pharmaverse
- Login: pharmaverse
- Kind: organization
- Location: Switzerland
- Repositories: 25
- Profile: https://github.com/pharmaverse
GitHub Events
Total
- Create event: 31
- Release event: 1
- Issues event: 95
- Watch event: 3
- Delete event: 22
- Issue comment event: 232
- Push event: 227
- Pull request event: 55
- Pull request review comment event: 266
- Pull request review event: 285
- Fork event: 4
Last Year
- Create event: 31
- Release event: 1
- Issues event: 95
- Watch event: 3
- Delete event: 22
- Issue comment event: 232
- Push event: 227
- Pull request event: 55
- Pull request review comment event: 266
- Pull request review event: 285
- Fork event: 4
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 74
- Total pull requests: 85
- Average time to close issues: 26 days
- Average time to close pull requests: 11 days
- Total issue authors: 7
- Total pull request authors: 12
- Average comments per issue: 1.95
- Average comments per pull request: 3.14
- Merged pull requests: 63
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 60
- Pull requests: 64
- Average time to close issues: 23 days
- Average time to close pull requests: 12 days
- Issue authors: 7
- Pull request authors: 11
- Average comments per issue: 1.77
- Average comments per pull request: 3.19
- Merged pull requests: 48
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- manciniedoardo (38)
- AndersAskeland (29)
- Siddhesh2097 (3)
- Fanny-Gautier (1)
- bundfussr (1)
- rossfarrugia (1)
- yurovska (1)
Pull Request Authors
- AndersAskeland (31)
- manciniedoardo (14)
- Siddhesh2097 (11)
- yurovska (6)
- kiwi5104679 (6)
- starosto (4)
- kathrinflunkert (4)
- cosmiiccat (2)
- biocyberman (2)
- jimrothstein (2)
- nissinbo (2)
- Sonali-netizen (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- cran 256 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 2
- Total maintainers: 1
cran.r-project.org: admiralmetabolic
Metabolism Extension Package for ADaM in 'R' Asset Library
- Homepage: https://pharmaverse.github.io/admiralmetabolic/
- Documentation: http://cran.r-project.org/web/packages/admiralmetabolic/admiralmetabolic.pdf
- License: Apache License (≥ 2)
-
Latest release: 0.2.0
published 11 months ago
Rankings
Maintainers (1)
Dependencies
- R >= 4.1 depends
- admiral >= 1.0.0 imports
- admiraldev >= 1.0.0 imports
- dplyr >= 1.0.5 imports
- hms >= 0.5.3 imports
- lifecycle >= 0.1.0 imports
- lubridate >= 1.7.4 imports
- magrittr >= 1.5 imports
- purrr >= 0.3.3 imports
- rlang >= 0.4.4 imports
- stringr >= 1.4.0 imports
- tidyr >= 1.0.2 imports
- tidyselect >= 1.1.0 imports
- DT * suggests
- diffdf * suggests
- htmltools * suggests
- knitr * suggests
- methods * suggests
- pharmaversesdtm >= 0.2.0 suggests
- reactable * suggests
- readxl * suggests
- rmarkdown * suggests
- testthat >= 3.0.0 suggests
- tibble * suggests