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birdscanR

R package to extract and manipulate data from Birdscan MR1 radars

https://github.com/birdscancommunity/birdscanr

Science Score: 49.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 6 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (18.1%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

R package to extract and manipulate data from Birdscan MR1 radars

Basic Info
Statistics
  • Stars: 3
  • Watchers: 3
  • Forks: 4
  • Open Issues: 17
  • Releases: 3
Created about 4 years ago · Last pushed 11 months ago
Metadata Files
Readme Changelog Contributing License Code of conduct

README.Rmd 

---
output: github_document
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```

# birdscanR


[![CRAN status](https://www.r-pkg.org/badges/version/birdscanR)](https://CRAN.R-project.org/package=birdscanR)
[![CRAN checks](https://badges.cranchecks.info/worst/birdscanR.svg)](https://cran.r-project.org/web/checks/check_results_birdscanR.html)
[![R-CMD-check](https://github.com/BirdScanCommunity/birdscanR/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/BirdScanCommunity/birdscanR/actions/workflows/R-CMD-check.yaml)
[![repo status](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.7326820.svg)](https://doi.org/10.5281/zenodo.7326820)


BirdscanR is an R package to extract data from Birdscan MR1 SQL vertical-looking radar databases, filter, and process them to Migration Traffic Rates (# objects per hour and km) or density (# objects per km3) of, for example birds, and insects. Object classifications in the 'Birdscan MR1' databases are based on the dataset of [Haest et al. (2021)](https://doi.org10.5281/zenodo.5734960). Migration Traffic Rates and densities can be calculated separately for different height bins (with a height resolution of choice) as well as over time periods of choice (e.g., 1/2 hour, 1 hour, 1 day, day/night, the full time period of observation, and anything in between). Two plotting functions are also included to explore the data in the SQL databases and the resulting Migration Traffic Rate results. For details on the Migration Traffic Rate calculation procedures, see [Schmid et al. (2019)](https://doi.org/10.1111/ecog.04025).

To get started, see:

- [Get started](https://birdscancommunity.github.io/birdscanR/articles/birdscanR.html): an introduction to the package's main functionalities.
- [Function reference](https://birdscancommunity.github.io/birdscanR/reference/index.html): overview of all functions.
- [More HowTo Guides](https://birdscancommunity.github.io/birdscanR/articles/): Additional guides to get you up and going with the different functionality of the package.

## Installation

Install the latest released version from CRAN:

```{r, eval = FALSE}
install.packages("birdscanR")
```

Or the development version from [GitHub](https://github.com/BirdScanCommunity/birdscanR):

```{r, eval = FALSE}
# install.packages("devtools")
devtools::install_github("BirdScanCommunity/birdscanR")
```




## Meta

- We welcome [contributions](https://BirdScanCommunity.github.io/birdscanR/CONTRIBUTING.html) including bug reports.
- License: GPL-3
- Get [citation information](https://BirdScanCommunity.github.io/birdscanR/authors.html#citation) for birdscanR in R doing `citation("birdscanR")`.
- Please note that this project is released with a [Contributor Code of Conduct](https://BirdScanCommunity.github.io/birdscanR/CODE_OF_CONDUCT.html). By participating in this project you agree to abide by its terms.

Owner

  • Name: BirdScan Community
  • Login: BirdScanCommunity
  • Kind: organization

GitHub Events

Total
  • Issues event: 20
  • Delete event: 5
  • Member event: 2
  • Issue comment event: 10
  • Push event: 107
  • Pull request review event: 10
  • Pull request event: 33
  • Fork event: 2
  • Create event: 12
Last Year
  • Issues event: 20
  • Delete event: 5
  • Member event: 2
  • Issue comment event: 10
  • Push event: 107
  • Pull request review event: 10
  • Pull request event: 33
  • Fork event: 2
  • Create event: 12

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 51
  • Total pull requests: 48
  • Average time to close issues: 7 months
  • Average time to close pull requests: 28 days
  • Total issue authors: 7
  • Total pull request authors: 7
  • Average comments per issue: 1.24
  • Average comments per pull request: 0.33
  • Merged pull requests: 29
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 14
  • Pull requests: 38
  • Average time to close issues: 20 days
  • Average time to close pull requests: 12 days
  • Issue authors: 2
  • Pull request authors: 5
  • Average comments per issue: 0.21
  • Average comments per pull request: 0.18
  • Merged pull requests: 23
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • BirgenH (36)
  • baptischmi (7)
  • peterdesmet (2)
  • fabian-hertner (2)
  • rsbivand (1)
  • AnyaNest (1)
  • dgpreatoni (1)
Pull Request Authors
  • baptischmi (24)
  • peterdesmet (12)
  • bart1 (6)
  • BirgenH (5)
  • Rafnuss (4)
  • helenes45 (2)
  • jedgroev (1)
Top Labels
Issue Labels
enhancement (18) documentation (15) bug (5) lowPriorityCodeFormatting (1) invalid (1) wontfix (1)
Pull Request Labels
enhancement (3) documentation (1)

Packages

  • Total packages: 1
  • Total downloads:
    • cran 314 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 3
  • Total maintainers: 1
cran.r-project.org: birdscanR

Migration Traffic Rate Calculation Package for 'Birdscan MR1' Radars

  • Versions: 3
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 314 Last month
Rankings
Stargazers count: 28.5%
Forks count: 28.8%
Dependent packages count: 29.8%
Average: 33.1%
Dependent repos count: 35.5%
Downloads: 42.9%
Maintainers (1)
birgen.haest@vogelwarte.ch
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
  • DBI * imports
  • RODBC * imports
  • RPostgreSQL * imports
  • dplyr * imports
  • ggplot2 * imports
  • grDevices * imports
  • magrittr * imports
  • maptools * imports
  • methods * imports
  • modi * imports
  • reshape2 * imports
  • rstudioapi * imports
  • sp * imports
  • stats * imports
  • tibble * imports
  • tidyr * imports
  • utils * imports
  • knitr * suggests