Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 3 DOI reference(s) in README -
○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.5%) to scientific vocabulary
Last synced: 10 months ago
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JSON representation
Repository
seeds package for R
Basic Info
- Host: GitHub
- Owner: Newmi1988
- License: other
- Language: R
- Default Branch: master
- Size: 659 KB
Statistics
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 0
Created over 8 years ago
· Last pushed almost 5 years ago
Metadata Files
Readme
License
ReadMe.md
R seeds package
Algorithms to calculate the hidden inputs of systems of differential equations. These hidden inputs can be interpreted as a control that tries to minimize the discrepancies between a given model and taken measurements. The idea is also called the Dynamic Elastic Net, as proposed in the paper "Learning (from) the errors of a systems biology model" (Engelhardt, Froelich, Kschischo 2016) doi:10.1038/srep20772
Owner
- Name: Tobias Newmiwaka
- Login: Newmi1988
- Kind: user
- Location: Germany
- Repositories: 5
- Profile: https://github.com/Newmi1988
GitHub Events
Total
Last Year
Committers
Last synced: about 3 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Newmi1988 | n****8@g****m | 329 |
| Benjamin Engelhardt | b****t@a****m | 22 |
| Newmi1988 | n****t@h****e | 3 |
Committer Domains (Top 20 + Academic)
hotmail.de: 1
abbvie.com: 1
Issues and Pull Requests
Last synced: about 1 year ago
All Time
- Total issues: 0
- Total pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 2
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Total downloads:
- cran 120 last-month
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Total dependent packages: 0
(may contain duplicates) -
Total dependent repositories: 0
(may contain duplicates) - Total versions: 3
- Total maintainers: 1
cran.r-project.org: seeds
Estimate Hidden Inputs using the Dynamic Elastic Net
- Homepage: https://github.com/Newmi1988/seeds
- Documentation: http://cran.r-project.org/web/packages/seeds/seeds.pdf
- License: MIT + file LICENSE
- Status: removed
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Latest release: 0.9.1
published almost 6 years ago
Rankings
Forks count: 28.8%
Dependent packages count: 29.8%
Stargazers count: 35.2%
Dependent repos count: 35.5%
Average: 38.4%
Downloads: 63.0%
Maintainers (1)
Last synced:
12 months ago
conda-forge.org: r-seeds
- Homepage: https://github.com/Newmi1988/seeds
- License: MIT
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Latest release: 0.9.1
published over 5 years ago
Rankings
Dependent repos count: 34.0%
Dependent packages count: 51.2%
Average: 52.2%
Forks count: 61.1%
Stargazers count: 62.4%
Last synced:
10 months ago
Dependencies
DESCRIPTION
cran
- R >= 3.5.0 depends
- Deriv >= 3.8.4 imports
- Hmisc * imports
- MASS * imports
- R.utils * imports
- Ryacas * imports
- callr * imports
- coda * imports
- deSolve >= 1.20 imports
- dplyr * imports
- ggplot2 * imports
- graphics * imports
- matrixStats * imports
- methods * imports
- mvtnorm * imports
- pracma >= 2.1.4 imports
- statmod * imports
- stats * imports
- tidyr * imports
- knitr * suggests
- rmarkdown * suggests
- rsbml * suggests