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BayesianLaterality

Bayes classifier for predicting latent hemispheric dominance from observed laterality.

https://github.com/lcbc-uio/bayesianlaterality

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 2 DOI reference(s) in README
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 2 committers (50.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (12.8%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Bayes classifier for predicting latent hemispheric dominance from observed laterality.

Basic Info
  • Host: GitHub
  • Owner: LCBC-UiO
  • Language: R
  • Default Branch: master
  • Homepage:
  • Size: 59.6 KB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Created over 7 years ago · Last pushed almost 3 years ago
Metadata Files
Readme

README.Rmd 

---
output: github_document
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```

# BayesianLaterality


[![CRAN_Status_Badge](https://www.r-pkg.org/badges/version/BayesianLaterality)](https://cran.r-project.org/package=BayesianLaterality)
[![R-CMD-check](https://github.com/LCBC-UiO/BayesianLaterality/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/LCBC-UiO/BayesianLaterality/actions/workflows/R-CMD-check.yaml)


BayesianLaterality contains a function for predicting latent hemispheric dominance based on observed laterality using a Bayes classifier developed by [Sørensen and Westerhausen (2020)](https://doi.org/10.1080/1357650X.2020.1769124). See also the [accompanying Shiny app](https://osorensen.shinyapps.io/BayesianLateralityApp/).

## Installation


You can install BayesianLaterality from [CRAN](https://cran.r-project.org/web/packages/BayesianLaterality/) with:

```{r, eval=FALSE}
install.packages("BayesianLaterality")
```

Install the latest development version from [GitHub](https://github.com/LCBC-UiO/BayesianLaterality) with:

``` r
# install.packages("remotes")
remotes::install_github("LCBC-UiO/BayesianLaterality")
```


## Application Example

```{r}
library(BayesianLaterality)
```


The main (and only) function of the package is `predict_dominance()`. To see the arguments that can be set by the user and a more extended example, type `?predict_dominance` in the R terminal. Here is a simple example. The dataset `example_data1` contains three laterality measurements on three right-handed individuals.

```{r}
example_data1
```

We then obtain predicted hemispheric dominance as follows. The ID column reflects the row in the original dataset.

```{r}
predict_dominance(example_data1)
```

Owner

  • Name: Center for Lifespan Changes in Brain and Cognition, University of Oslo
  • Login: LCBC-UiO
  • Kind: organization
  • Email: hukommelse@psykologi.uio.no
  • Location: Oslo, Norway

Online repository of supplemental materials and scripts. Part of @Lifebrain.

GitHub Events

Total
Last Year

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 49
  • Total Committers: 2
  • Avg Commits per committer: 24.5
  • Development Distribution Score (DDS): 0.143
Past Year
  • Commits: 6
  • Committers: 1
  • Avg Commits per committer: 6.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Øystein Sørensen o****s@m****o 42
Øystein Sørensen o****n@h****m 7
Committer Domains (Top 20 + Academic)
medisin.uio.no: 1

Issues and Pull Requests

Last synced: over 2 years ago

All Time
  • Total issues: 1
  • Total pull requests: 6
  • Average time to close issues: N/A
  • Average time to close pull requests: 3 minutes
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 0.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 6
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • osorensen (6)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 274 last-month
  • Total docker downloads: 41,971
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 3
  • Total maintainers: 1
cran.r-project.org: BayesianLaterality

Predict Brain Asymmetry Based on Handedness and Dichotic Listening

  • Versions: 3
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 274 Last month
  • Docker Downloads: 41,971
Rankings
Forks count: 28.8%
Dependent packages count: 29.8%
Stargazers count: 35.2%
Average: 35.4%
Dependent repos count: 35.5%
Downloads: 47.9%
Maintainers (1)
oystein.sorensen.1985@gmail.com
Last synced: 12 months ago

Dependencies

DESCRIPTION cran
  • R >= 2.10 depends
  • Rdpack * imports
  • dplyr >= 1.0.2 imports
  • purrr >= 0.3.4 imports
  • rlang >= 0.4.7 imports
  • tidyr >= 1.1.2 imports
  • tmvtnorm >= 1.4 imports
  • roxygen2 * suggests
  • testthat >= 2.1.0 suggests