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simrec

Simulation of recurrent event data in the total time model

https://github.com/federicomarini/simrec

Science Score: 36.0%

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    CITATION.cff file
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    2 of 4 committers (50.0%) from academic institutions
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    Scientific vocabulary similarity
    Low similarity (10.3%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Simulation of recurrent event data in the total time model

Basic Info
Statistics
  • Stars: 2
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created over 11 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog

README.md

simrec

R build status <!-- badges: end -->

An R-Package for Simulation of Recurrent Events

simrec allows simulation of recurrent event data following the multiplicative intensity model described in Andersen and Gill (1982), with the baseline hazard being a function of the total/calendar time.

To induce between-subject-heterogeneity, a random effect covariate (frailty term) can be incorporated.

Furthermore, via simreccomp simulation of data following a multistate model with recurrent event data of one type and a competing event is possible.

simrecint gives the possibility to additionally simulate a recruitment time for each individual and cut the data to an interim data set.

With simrecPlot and simreccompPlot the data can be plotted.

Installation

To install the development version for the package simrec, please start a current version of R and type (using remotes):

```r

currently this can be done via github

install.packages("remotes") # if needed remotes::installgithub("federicomarini/simrec") # or if needed: remotes::installgithub("federicomarini/simrec", build_vignettes=TRUE, dependencies = TRUE) ```

Vignette

To inspect the vignette and the code used in it, type:

```r vignette("simrec-vignette-Rhelp")

and/or

browseVignettes("simrec") ```

Contact

For additional details regarding the functions of simrec, please consult the documentation.

Owner

  • Name: Federico Marini
  • Login: federicomarini
  • Kind: user
  • Location: Mainz
  • Company: University Medical Center, Mainz

Virchow Fellow, Bioinformatician @ Institute of Medical Biostatistics, Epidemiology and Informatics, Mainz (@imbeimainz)

GitHub Events

Total
  • Push event: 7
Last Year
  • Push event: 7

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 122
  • Total Committers: 4
  • Avg Commits per committer: 30.5
  • Development Distribution Score (DDS): 0.164
Past Year
  • Commits: 5
  • Committers: 1
  • Avg Commits per committer: 5.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Federico Marini m****f@u****e 102
Katharina Ingel i****l@u****e 18
katharinaingel k****l 1
unknown i****l@I****e 1
Committer Domains (Top 20 + Academic)
uni-mainz.de: 2 ingel-nb1.imbei.de: 1

Issues and Pull Requests

Last synced: 12 months ago

All Time
  • Total issues: 0
  • Total pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: 6 days
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • federicomarini (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 170 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 2
  • Total maintainers: 1
cran.r-project.org: simrec

Simulation of Recurrent Event Data for Non-Constant Baseline Hazard

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 170 Last month
Rankings
Forks count: 21.9%
Dependent packages count: 29.8%
Stargazers count: 31.7%
Dependent repos count: 35.5%
Average: 41.3%
Downloads: 87.7%
Maintainers (1)
marinif@uni-mainz.de
Last synced: 12 months ago

Dependencies

DESCRIPTION cran
  • R >= 2.10 depends
  • graphics * imports
  • stats * imports
  • DT * suggests
  • knitr * suggests
  • rmarkdown * suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/cache v1 composite
  • actions/checkout v2 composite
  • actions/upload-artifact master composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
.github/workflows/pkgdown.yaml actions
  • actions/cache v1 composite
  • actions/checkout v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite