swaRmverse
An R package for the comparative analysis of collective motion data in the swarm space.
Science Score: 13.0%
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Low similarity (11.7%) to scientific vocabulary
Repository
An R package for the comparative analysis of collective motion data in the swarm space.
Basic Info
- Host: GitHub
- Owner: marinapapa
- License: gpl-3.0
- Language: HTML
- Default Branch: main
- Homepage: https://marinapapa.github.io/swaRmverse/
- Size: 2.27 MB
Statistics
- Stars: 2
- Watchers: 2
- Forks: 0
- Open Issues: 0
- Releases: 1
Metadata Files
README.md
swaRmverse 
Description
An R package for the comparative analysis of collective motion data in the swarm space.
Based on the packages trackdf and swaRm, swaRmverse aims to standardize how data of collective motion are analyzed and support the comparison of properties within and across species and contexts.
swaRmverse is a work in progress, functions are likely to change as the package gets developed.
Publication
Further information on the functionality of the package, along with some use cases, will be soon available in our accompanying publication:
Papadopoulou M, Garnier S, King AJ. swaRmverse: an R package for the comparative analysis of collective motion. Under review.
The swarm space and the included metrics are first described here:
Papadopoulou M., Furtbauer I., O'Bryan L.R., Garnier S., Georgopoulou D.G., Bracken A.M., Christensen C. and King A.J. (2023) Dynamics of collective motion across time and species. Philosophical Transactions of the Royal Society B 378.1874 doi:10.1098/rstb.2022.0068.
Acknowledgements
The development of this package was supported by the 2G-SWARM ONR grant awarded to Dr. Andrew J. King at Swansea University (UK).
Owner
- Name: Marina Papadopoulou
- Login: marinapapa
- Kind: user
- Location: Swansea, UK
- Company: University of Swansea
- Website: https://www.linkedin.com/in/marina-papadopoulou
- Twitter: MarinaVPap
- Repositories: 2
- Profile: https://github.com/marinapapa
Computational biologist, Postdoc on animal collective behaviour. Cafes, cats, and bad programming jokes lover. #makeswarmsnotwar
GitHub Events
Total
- Watch event: 2
- Push event: 1
Last Year
- Watch event: 2
- Push event: 1
Packages
- Total packages: 1
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Total downloads:
- cran 170 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 2
- Total maintainers: 1
cran.r-project.org: swaRmverse
Swarm Space Creation
- Homepage: https://marinapapa.github.io/swaRmverse/
- Documentation: http://cran.r-project.org/web/packages/swaRmverse/swaRmverse.pdf
- License: GPL-3
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Latest release: 0.1.1
published over 1 year ago
Rankings
Maintainers (1)
Dependencies
- actions/checkout v4 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
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- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- JamesIves/github-pages-deploy-action v4.5.0 composite
- actions/checkout v4 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- actions/checkout v4 composite
- actions/upload-artifact v4 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- R >= 3.5 depends
- Rtsne * imports
- geosphere * imports
- parallel * imports
- pbapply * imports
- swaRm * imports
- trackdf * imports
- covr * suggests
- ggplot2 * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat >= 3.0.0 suggests