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r4pde

R package developed as a companion to the book "R for Plant Disease Epidemiology" (R4PDE).

https://github.com/emdelponte/r4pde

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (12.3%) to scientific vocabulary

Keywords

botanical-epidemiology data-analysis data-analysis-r epidemics r rlang rstats
Last synced: 6 months ago · JSON representation

Repository

R package developed as a companion to the book "R for Plant Disease Epidemiology" (R4PDE).

Basic Info
Statistics
  • Stars: 4
  • Watchers: 2
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Topics
botanical-epidemiology data-analysis data-analysis-r epidemics r rlang rstats
Created about 3 years ago · Last pushed 8 months ago
Metadata Files
Readme License

README.md

r4pde

CRAN Downloads\ An R package developed as a companion to the book R for Plant Disease Epidemiology. It provides access to a suite of specialized R functions and datasets tailored for teaching and analyzing plant disease epidemiology. This package supports researchers, students, and practitioners by offering tools for disease quantification, spatial analysis and predictive modeling.

Installation

Install the stable release from CRAN.

r install.packages("r4pde")

The development version of {r4pde} is available from GitHub. To install it along with its dependencies (including Bioconductor packages), use the pak package:

r if (!requireNamespace("pak", quietly = TRUE)) install.packages("pak") pak::pkg_install("emdelponte/r4pde")

Alternatively, using remotes:

r if (!requireNamespace("remotes", quietly = TRUE)) install.packages("remotes") remotes::install_github("emdelponte/r4pde")

Note: The package depends on Icens, which is available from Bioconductor. Both pak and remotes will install it automatically if needed.

Reporting Issues

Please report any bugs or issues via the GitHub issue tracker.

License and Citation

  • This package is released under the MIT license.
  • To cite the package, please use:

r citation("r4pde")

Owner

  • Name: Emerson M. Del Ponte
  • Login: emdelponte
  • Kind: user
  • Location: Viçosa, MG
  • Company: Universidade Federal de Viçosa

Assoc. Professor of Plant Pathology Departamento de Fitopatologia Universidade Federal de Viçosa Viçosa, MG Brazil

GitHub Events

Total
  • Push event: 20
Last Year
  • Push event: 20

Committers

Last synced: over 1 year ago

All Time
  • Total Commits: 48
  • Total Committers: 1
  • Avg Commits per committer: 48.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 36
  • Committers: 1
  • Avg Commits per committer: 36.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Emerson M. Del Ponte e****e@g****m 48

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 1
  • Total pull requests: 1
  • Average time to close issues: 4 months
  • Average time to close pull requests: about 18 hours
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 3.0
  • Average comments per pull request: 1.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • lucianhuang (1)
Pull Request Authors
  • adamhsparks (2)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 285 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 1
  • Total maintainers: 1
cran.r-project.org: r4pde

Companion to R for Plant Disease Epidemiology Book

  • Versions: 1
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 285 Last month
Rankings
Dependent packages count: 26.1%
Dependent repos count: 32.2%
Average: 48.2%
Downloads: 86.4%
Maintainers (1)
delponte@ufv.br
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • R >= 2.10 depends
  • dplyr * imports
  • ggplot2 * imports
  • igraph * imports
  • lubridate * imports
  • purrr * imports
  • tibble * imports
  • tidyr * imports