Data

Tools

Indexes

Applications

Experiments

Open Source Science

hidradenitis

An R package to calculate clinical scores for hidradenitis suppurativa (HS), a dermatologic disease

https://github.com/humanpred/hidradenitis

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.4%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

An R package to calculate clinical scores for hidradenitis suppurativa (HS), a dermatologic disease

Basic Info
Statistics
  • Stars: 1
  • Watchers: 1
  • Forks: 0
  • Open Issues: 4
  • Releases: 1
Created about 2 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog License

README.md

hidradenitis

R-CMD-check Codecov test coverage CRAN status CodeFactor <!-- badges: end -->

The goal of the hidradenitis package is to support use and interpretation of clinical scores for hidradenitis suppurativa.

Installation

Stable version

You can install the stable version of hidradenitis from CRAN with:

r install.packages("devtools")

Development version

You can install the development version of hidradenitis from GitHub with:

``` r

install.packages("devtools")

devtools::install_github("humanpred/hidradenitis") ```

Example

This is a basic example which shows you how to solve a common problem:

``` r library(hidradenitis)

hasirnum( bsapercentwithinsite = c(0, 0, 0, 0, 5, 1, 4.3, 1.2, 6.8, 7.2), bodysite = c("Right Axilla", "Buttocks including Intergluteal Cleft", "Back", "Left Thigh", "Head & Neck", "Left Axilla", "Chest", "Pubis & Genitals", "Abdomen", "Right Thigh"), inflamcolorchg = c(0, 0, 0, 0, 2, 3, 1, 3, 2, 0), induration = c(0, 0, 0, 0, 2, 3, 1, 3, 2, 0), openskin_surface = c(0, 0, 0, 0, 2, 3, 1, 3, 2, 0), tunnels = c(0, 0, 0, 0, 2, 3, 1, 3, 2, 0) )

hiscr( baselineabscess = c(3, 2, 4), baselinenodule = c(5, 4, 6), baselinefistula = c(2, 1, 3), timepointabscess = c(1, 1, 2), timepointnodule = c(2, 3, 2), timepointfistula = c(2, 1, 3), percentage = 50 )

hspga <- hspganum( abscessfistula = c(0, 0, 1, 0, 1, 2, 6), inflammatorynodule = c(0, 0, 0, 3, 5, 8, 12), noninflammatorynodule = c(0, 1, 0, 0, 0, 0, 0) ) hspgachar(hspga)

ihs4 <- ihs4num( nodules = c(5, 3, 2), abscesses = c(2, 1, 0), drainingtunnels = c(1, 2, 3) ) ihs4_char(ihs4)

```

Owner

  • Name: humanpred
  • Login: humanpred
  • Kind: organization

GitHub Events

Total
  • Release event: 1
  • Push event: 6
  • Pull request event: 1
  • Create event: 2
Last Year
  • Release event: 1
  • Push event: 6
  • Pull request event: 1
  • Create event: 2

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 60
  • Total Committers: 3
  • Avg Commits per committer: 20.0
  • Development Distribution Score (DDS): 0.233
Past Year
  • Commits: 43
  • Committers: 3
  • Avg Commits per committer: 14.333
  • Development Distribution Score (DDS): 0.186
Top Committers
Name Email Commits
Bill Denney w****y@h****m 46
Devon Bartlett d****t@h****m 13
olivroy 5****y 1
Committer Domains (Top 20 + Academic)
humanpredictions.com: 2

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 28
  • Total pull requests: 27
  • Average time to close issues: 13 days
  • Average time to close pull requests: 2 days
  • Total issue authors: 2
  • Total pull request authors: 3
  • Average comments per issue: 0.75
  • Average comments per pull request: 0.52
  • Merged pull requests: 25
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • billdenney (22)
  • DBartlettHP (4)
  • olivroy (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 185 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 2
  • Total maintainers: 1
cran.r-project.org: hidradenitis

Calculate Clinical Scores for Hidradenitis Suppurativa (HS), a Dermatologic Disease

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 185 Last month
Rankings
Dependent packages count: 28.6%
Dependent repos count: 35.2%
Average: 50.1%
Downloads: 86.6%
Maintainers (1)
wdenney@humanpredictions.com
Last synced: 12 months ago

Dependencies

.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v4 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.5.0 composite
  • actions/checkout v4 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v4 composite
  • actions/upload-artifact v4 composite
  • codecov/codecov-action v4 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • spelling * suggests
  • testthat >= 3.0.0 suggests