idendr0

Interactive Dendrograms (backport of idendro to Tcl/Tk)

https://github.com/tsieger/idendr0

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
  • .zenodo.json file
  • DOI references
    Found 3 DOI reference(s) in README
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.7%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Interactive Dendrograms (backport of idendro to Tcl/Tk)

Basic Info
  • Host: GitHub
  • Owner: tsieger
  • Language: R
  • Default Branch: master
  • Size: 3.97 MB
Statistics
  • Stars: 7
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Created over 11 years ago · Last pushed about 5 years ago
Metadata Files
Readme

README.md

idendr0

'idendr0' is an interactive dendrogram that enables the user to select and color clusters, to zoom and pan the dendrogram, and to visualize the clustered data not only in a built-in heat map, but also in GGobi interactive plots and user-supplied plots.

idendr0 is a backport of idendro to base R graphics and Tcl/Tk GUI.

Documentation

A paper in the Journal of Statistical Software and idendro vignette.

To install:

  • the latest released version: install.packages("idendr0")
  • the latest development version: devtools::install_github("tsieger/idendr0")
A simple example:
library(idendr0)
hc <- hclust(dist(iris[, 1:4]))
idendro(hc, iris)

Example

Integration with other plots

Please see demo(idendroWithScatterAndParcoord), which, in addition to the dendrogram, creates two feature space plots:

Example

For more demos, please run demo(package="idendr0")'.

Find out more at https://github.com/tsieger/idendr0.

Owner

  • Name: Tomáš Sieger
  • Login: tsieger
  • Kind: user

GitHub Events

Total
Last Year

Committers

Last synced: over 3 years ago

All Time
  • Total Commits: 104
  • Total Committers: 3
  • Avg Commits per committer: 34.667
  • Development Distribution Score (DDS): 0.192
Top Committers
Name Email Commits
Tomas Sieger t****r@s****e 84
Tomas Sieger t****r@u****m 17
tsieger t****s@s****r 3
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 12 months ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 2
  • Total downloads:
    • cran 257 last-month
  • Total docker downloads: 43,390
  • Total dependent packages: 0
    (may contain duplicates)
  • Total dependent repositories: 0
    (may contain duplicates)
  • Total versions: 8
  • Total maintainers: 1
proxy.golang.org: github.com/tsieger/idendr0
  • Versions: 4
  • Dependent Packages: 0
  • Dependent Repositories: 0
Rankings
Dependent packages count: 5.5%
Average: 5.7%
Dependent repos count: 5.9%
Last synced: 12 months ago
cran.r-project.org: idendr0

Interactive Dendrograms

  • Versions: 4
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 257 Last month
  • Docker Downloads: 43,390
Rankings
Stargazers count: 19.8%
Forks count: 21.9%
Average: 29.0%
Dependent packages count: 29.8%
Dependent repos count: 35.5%
Downloads: 37.9%
Maintainers (1)
Last synced: 12 months ago

Dependencies

DESCRIPTION cran
  • grDevices * imports
  • graphics * imports
  • stats * imports
  • tcltk * imports
  • tkrplot * imports
  • DendSer * suggests
  • RColorBrewer * suggests
  • cluster * suggests
  • datasets * suggests
  • loon * suggests
  • rggobi * suggests