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ncappc

NCA Calculation and Population PK Model Diagnosis

https://github.com/uupharmacometrics/ncappc

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
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    Academic publication links
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    Academic email domains
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    Institutional organization owner
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    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (17.0%) to scientific vocabulary
Last synced: 9 months ago · JSON representation

Repository

NCA Calculation and Population PK Model Diagnosis

Basic Info
Statistics
  • Stars: 16
  • Watchers: 10
  • Forks: 4
  • Open Issues: 6
  • Releases: 1
Created over 9 years ago · Last pushed about 1 year ago
Metadata Files
Readme Changelog

README.Rmd 

---
output: github_document
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```

# ncappc: NCA Calculations and population model diagnosis


[![CRAN_Status_Badge](http://www.r-pkg.org/badges/version/ncappc)](https://CRAN.R-project.org/package=ncappc)
[![R-CMD-check](https://github.com/UUPharmacometrics/ncappc/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/UUPharmacometrics/ncappc/actions/workflows/R-CMD-check.yaml)
[![Codecov test coverage](https://codecov.io/gh/UUPharmacometrics/ncappc/graph/badge.svg)](https://app.codecov.io/gh/UUPharmacometrics/ncappc)


ncappc performs NCA Calculations and population model diagnosis using posterior predictive checks generated from data simulated by a population model. 

ncappc is a flexible tool that can perform: 

1. Traditional non-compartmental analysis (NCA) and 
2. Simulation-based posterior predictive checks for population pharmacokinetic (PK) and/or pharmacodynamic (PKPD) models using NCA metrics. 

You can read more at the [website for the stable version of ncappc](https://uupharmacometrics.github.io/ncappc/) or the [website for the development version of ncappc](https://uupharmacometrics.github.io/ncappc/dev/)

## Installation

You need to have R installed.  Download the latest version of R from www.r-project.org.

You can install the latest stable release from CRAN:  

```r
install.packages("ncappc")
```

You can install the development version of ncappc from [GitHub](https://github.com/) with:

``` r
# install.packages("pak")
pak::pak("UUPharmacometrics/ncappc")
```

Owner

  • Name: Uppsala University, Pharmacometrics Research Group
  • Login: UUPharmacometrics
  • Kind: organization
  • Location: Uppsala, Sweden

GitHub Events

Total
  • Create event: 2
  • Release event: 1
  • Issues event: 3
  • Push event: 15
Last Year
  • Create event: 2
  • Release event: 1
  • Issues event: 3
  • Push event: 15

Packages

  • Total packages: 1
  • Total downloads:
    • cran 381 last-month
  • Total docker downloads: 42,053
  • Total dependent packages: 0
  • Total dependent repositories: 1
  • Total versions: 6
  • Total maintainers: 1
cran.r-project.org: ncappc

NCA Calculations and Population Model Diagnosis

  • Versions: 6
  • Dependent Packages: 0
  • Dependent Repositories: 1
  • Downloads: 381 Last month
  • Docker Downloads: 42,053
Rankings
Docker downloads count: 0.6%
Average: 21.2%
Dependent repos count: 24.0%
Dependent packages count: 28.8%
Downloads: 31.6%
Maintainers (1)
andrew.hooker@uu.se
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • R >= 2.15.3 depends
  • PopED * imports
  • bookdown * imports
  • dplyr * imports
  • ggplot2 >= 2.0.0 imports
  • grDevices * imports
  • grid * imports
  • gridExtra >= 2.0.0 imports
  • gtable * imports
  • knitr * imports
  • lazyeval * imports
  • magrittr * imports
  • purrr * imports
  • readr >= 0.2.2 imports
  • reshape2 * imports
  • rlang * imports
  • rmarkdown * imports
  • scales * imports
  • stats * imports
  • tibble * imports
  • tidyr * imports
  • xtable * imports
  • testthat * suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v4 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.5.0 composite
  • actions/checkout v4 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v4 composite
  • actions/upload-artifact v4 composite
  • codecov/codecov-action v5 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite