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hrf

R package for hemodynamic response function (HRF) modeling

https://github.com/mandymejia/hrf

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
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    Academic email domains
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    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.7%) to scientific vocabulary
Last synced: 7 months ago · JSON representation

Repository

R package for hemodynamic response function (HRF) modeling

Basic Info
  • Host: GitHub
  • Owner: mandymejia
  • License: gpl-3.0
  • Language: R
  • Default Branch: main
  • Size: 2.15 MB
Statistics
  • Stars: 1
  • Watchers: 2
  • Forks: 1
  • Open Issues: 0
  • Releases: 1
Created about 1 year ago · Last pushed 11 months ago
Metadata Files
Readme Changelog License

README.Rmd 

---
output: github_document
---



# hrf




[![CRAN status](https://www.r-pkg.org/badges/version/hrf)](https://cran.r-project.org/package=hrf)
[![R-CMD-check](https://github.com/mandymejia/hrf/workflows/R-CMD-check/badge.svg)](https://github.com/mandymejia/hrf/actions)



The `hrf` R package includes these main functions:

* `HRF_main` for HRF computation
* `multiGLM_fun` for testing different design matrices
* `multiGLM` for running `multiGLM_fun` on CIFTI data

## Important Note on Dependencies:

`hrf::multiGLM` requires the `ciftiTools` package, which requires an installation of Connectome Workbench.  It can be installed from the [HCP website](https://www.humanconnectome.org/software/get-connectome-workbench).

Owner

  • Name: Mandy Mejia
  • Login: mandymejia
  • Kind: user
  • Location: Bloomington, IN, USA
  • Company: Indiana University Department of Statistics

Assistant Professor in the Department of Statistics at Indiana University. PI of the StatMIND (Statistical Methods for Individualized Neuro-Discovery) lab.

GitHub Events

Total
  • Release event: 1
  • Watch event: 1
  • Member event: 2
  • Push event: 12
  • Pull request review event: 1
  • Pull request event: 3
  • Fork event: 1
  • Create event: 4
Last Year
  • Release event: 1
  • Watch event: 1
  • Member event: 2
  • Push event: 12
  • Pull request review event: 1
  • Pull request event: 3
  • Fork event: 1
  • Create event: 4

Packages

  • Total packages: 1
  • Total downloads:
    • cran 193 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 1
  • Total maintainers: 1
cran.r-project.org: hrf

Hemodynamic Response Function

  • Versions: 1
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 193 Last month
Rankings
Dependent packages count: 27.3%
Dependent repos count: 33.6%
Average: 49.2%
Downloads: 86.7%
Maintainers (1)
mandy.mejia@gmail.com
Last synced: 8 months ago

Dependencies

.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v4 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v3 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
DESCRIPTION cran
  • R >= 3.6.0 depends
  • Matrix * imports
  • ciftiTools >= 0.17.2 imports
  • fMRItools * imports
  • matrixStats * imports
  • methods * imports
  • stats * imports
  • covr * suggests
  • dplyr * suggests
  • ggplot2 * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • spelling * suggests
  • testthat >= 3.0.0 suggests