missforestpredict
Science Score: 13.0%
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○Scientific vocabulary similarity
Low similarity (6.6%) to scientific vocabulary
Repository
Basic Info
- Host: GitHub
- Owner: sibipx
- Language: R
- Default Branch: main
- Size: 984 KB
Statistics
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
- Releases: 0
Metadata Files
README.md
missForestPredict
missForestPredict is an adaptation of the missForest algorithm for prediction settings. It stores the initialization and imputation models and it can impute new (unseen) observations.
Check the vignettes for instructions on how to use the package.
This package is supported by the following preprint:
Albu, E., Gao, S., Wynants, L., & Van Calster, B. (2024). missForestPredict--Missing data imputation for prediction settings. https://doi.org/10.48550/arXiv.2407.03379.
Functionality:
uses ranger package for random forest models (fast imputation)
saves initialization & support for custom initialization
builds models for non-missing variables
saves imputation models for all iterations
imputes (predict) new observation(s)
user can specify variables to be imputed and predictors for each variable using predictormatrix and proportionusable_cases
error monitoring
convergence criteria: based on OOB or apparent performance (default OOB)
convergence criteria: NMSE for both continuous and categorical variables (multiclass included)
convergence criteria: custom weighting of the errors for each variable
Reporting Issues
Please report bugs or suggest features via: https://github.com/sibipx/missForestPredict/issues
Owner
- Name: elena
- Login: sibipx
- Kind: user
- Location: Belgium
- Company: KU Leuven
- Repositories: 1
- Profile: https://github.com/sibipx
PhD student, KU Leuven, Belgium
GitHub Events
Total
- Push event: 1
Last Year
- Push event: 1
Packages
- Total packages: 1
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Total downloads:
- cran 646 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 2
- Total maintainers: 1
cran.r-project.org: missForestPredict
Missing Value Imputation using Random Forest for Prediction Settings
- Homepage: https://github.com/sibipx/missForestPredict
- Documentation: http://cran.r-project.org/web/packages/missForestPredict/missForestPredict.pdf
- License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
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Latest release: 1.0.1
published about 1 year ago
Rankings
Maintainers (1)
Dependencies
- R >= 4.0 depends
- methods * imports
- ranger * imports
- stats * imports
- dplyr * suggests
- ggplot2 * suggests
- knitr * suggests
- rmarkdown * suggests
- tidyr * suggests