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svycoxme

https://github.com/bdrayton/svycoxme

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

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    CITATION.cff file
  • ✓
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    Found codemeta.json file
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    .zenodo.json file
    Found .zenodo.json file
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    DOI references
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    JOSS paper metadata
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    Scientific vocabulary similarity
    Low similarity (7.8%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: bdrayton
  • License: gpl-3.0
  • Language: R
  • Default Branch: dev
  • Size: 10.2 MB
Statistics
  • Stars: 0
  • Watchers: 1
  • Forks: 0
  • Open Issues: 2
  • Releases: 1
Created over 4 years ago · Last pushed 11 months ago
Metadata Files
Readme Changelog License

README.md

svycoxme

R-CMD-check <!-- badges: end -->

The goal of svycoxme is to fit mixed-effects proportional hazards models to data from complex samples. Most of the work is done by the coxme package. The svycoxme package provides wrappers to fit models using survey designs from the survey package, and provides variances estimation by Taylor series linearisation or replicate weights.

Installation

You can install svycoxme from CRAN with:

r install.packages("svycoxme")

You can install the development version of svycoxme from GitHub with:

``` r

install.packages("devtools")

devtools::install_github("bdrayton/svycoxme") ```

Example

This is a basic example using the samp_srcs dataset provided with the package.

``` r library(survey) library(svycoxme) des <- svydesign(ids = ~groupid, weights = ~weight, data = sampsrcs)

fit1 <- svycoxme(Surv(stattime, stat) ~ X1 + X2 + X3 + (1 | groupid), design = des)

summary(fit1)

```

Owner

  • Login: bdrayton
  • Kind: user

GitHub Events

Total
  • Create event: 2
  • Release event: 1
  • Issues event: 18
  • Delete event: 1
  • Issue comment event: 13
  • Push event: 51
  • Pull request event: 2
Last Year
  • Create event: 2
  • Release event: 1
  • Issues event: 18
  • Delete event: 1
  • Issue comment event: 13
  • Push event: 51
  • Pull request event: 2

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 10
  • Total pull requests: 1
  • Average time to close issues: about 2 months
  • Average time to close pull requests: 5 minutes
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 1.1
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 10
  • Pull requests: 1
  • Average time to close issues: about 2 months
  • Average time to close pull requests: 5 minutes
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 1.1
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • bdrayton (10)
Pull Request Authors
  • bdrayton (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 421 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 1
  • Total maintainers: 1
cran.r-project.org: svycoxme

Mixed-Effects Cox Models for Complex Samples

  • Versions: 1
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 421 Last month
Rankings
Dependent packages count: 26.6%
Dependent repos count: 32.7%
Average: 48.6%
Downloads: 86.6%
Maintainers (1)
brad.drayton@auckland.ac.nz
Last synced: 11 months ago