Science Score: 26.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (8.7%) to scientific vocabulary
Keywords from Contributors
Repository
Read Condensed CEP and Legacy CANOCO Files
Basic Info
- Host: GitHub
- Owner: vegandevs
- License: other
- Language: Fortran
- Default Branch: master
- Size: 84 KB
Statistics
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
- Releases: 5
Metadata Files
README.md
What is cepreader?
Cornell Ecology Programs (CEP) introduced a popular data file format
for ecological community data, and this format was later adopted by
CANOCO software with small modifications. Many legacy data sets are
still written in these formats. The cepreader package provides
function readCEP() to read these data files into R as a
data.frame or a sparse Matrix. The function does not handle all
possible CEP formats, but it handles transposed condensed format
which was the most popular one plus some other popular formats.
Why a Package?
The package has only function readCEP(). This function was earlier
included in the vegan package. However, the function is written in
FORTRAN, and FORTRAN input can interfere with other compiled code,
in particular in Windows. To minimize the risk of conflicts, reading
of CEP files was moved to a separate package. The CEP format can save
data in flexible forms as defined by a FORTRAN format specification
in the file, and this format is best interpreted using FORTRAN code.
The vegan package has function read.cep() that uses only R
code and can read many files written in transposed condensed format,
but this package is more versatile and robust and can handle a wider
array of CEP formats.
Released version
Owner
- Name: vegandevs
- Login: vegandevs
- Kind: organization
- Repositories: 4
- Profile: https://github.com/vegandevs
GitHub Events
Total
- Push event: 1
Last Year
- Push event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Jari Oksanen | j****n@o****i | 122 |
| Gavin Simpson | u****s@g****m | 2 |
| Tomas Kalibera | t****a@g****m | 1 |
| jarioksa | j****a@e****b | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: over 2 years ago
All Time
- Total issues: 7
- Total pull requests: 0
- Average time to close issues: 11 days
- Average time to close pull requests: N/A
- Total issue authors: 1
- Total pull request authors: 0
- Average comments per issue: 1.57
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: 6 days
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 3.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- jarioksa (6)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- cran 177 last-month
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 1
cran.r-project.org: cepreader
Read 'CEP' and Legacy 'CANOCO' Files
- Homepage: https://cran.r-project.org/
- Documentation: http://cran.r-project.org/web/packages/cepreader/cepreader.pdf
- License: MIT + file LICENCE
-
Latest release: 1.2-2
published about 3 years ago
Rankings
Maintainers (1)
Dependencies
- R >= 3.6.0 depends
- Matrix * imports
- actions/checkout v3 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- r-lib/actions/setup-tinytex v2 composite