icellr - 1.6.1

Wilcoxon test is added as an alternative to t-test and added options for a.adj methods. Also in the version 1.6.0 and possibly in 1.5.9 there was a bug in the averaging the clusters function “clust.avg.exp” that is now fixed. This was caused by a new change in CRAN rules to not use order on data frames.

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Published by rezakj about 5 years ago

icellr - 1.5.5

• New cell cycle analysis for G0, G1S, G2M, M, G1M and S phase.
• Pseudo-time Abstract KNetL map (PAK map).
• Gene-gene correlations.
• Plotting functions improved.

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Published by rezakj almost 6 years ago

icellr - 1.5.0

KNetL map added. And minor plotting fixes.

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Published by rezakj about 6 years ago

icellr - 1.3.4

Minor fixes in plotting functions.

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Published by rezakj about 6 years ago

icellr - 1.2.7

Fixes to some plotting functions. Small changes in impute function and DE functions.

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Published by rezakj over 6 years ago

icellr - 1.2.5

Anchor added. Some bug fixes.

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Published by rezakj over 6 years ago

icellr - 1.2.2

Batch correction using MNN (scran wrapper) is added. Minor changes in plotting functions! 3D UMAP

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Published by rezakj over 6 years ago

icellr - 1.2.0

More imputation methods.

Some minor fixes for heatmap function!

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Published by rezakj over 6 years ago

icellr - 1.1.2

A new function to demultiplex HTOs added.

Some minor fixes for gene.plot function and vdj functions.

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Published by rezakj over 6 years ago

icellr -

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Published by rezakj almost 7 years ago