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phenesse

https://github.com/mbelitz/phenesse

Science Score: 59.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 5 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 4 committers (25.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.2%) to scientific vocabulary
Last synced: 6 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: mbelitz
  • Language: R
  • Default Branch: master
  • Size: 130 KB
Statistics
  • Stars: 6
  • Watchers: 2
  • Forks: 3
  • Open Issues: 0
  • Releases: 5
Created over 6 years ago · Last pushed 9 months ago
Metadata Files
Readme Changelog

README.md

phenesse

phenesse: Estimate phenological metrics using presence-only data

CRAN_Status_Badge DOI

The phenesse package provides tools in R to estimate phenological metrics using presence only data. The package includes a new Weibull-parameterized estimator described in Belitz et al. (2020) (https://doi.org/10.1111/2041-210X.13448). Additionally, the package provides a non-parametric bootstrap approach to estimating confidence intervals for this estimator as well as quantile and mean estimates.

Note that generating confidence intervals of a Weibull-parameterized estimate is very computationally expensive. We recommend exploring parallelization options when generating many CIs of Weibull-parameterized estimates. An example of parallelization can be found in the vignette.

Installation

CRAN

phenesse is available on CRAN. Install using install.packages("phenesse")

GitHub

The development version of phenesse is available on GitHub. To install without a vignette, use: devtools::install_github("mbelitz/phenessse")

Owner

  • Login: mbelitz
  • Kind: user

Biodiversity informatician; Global change biologist; Ecological modeler

GitHub Events

Total
  • Issues event: 2
  • Watch event: 3
  • Issue comment event: 1
  • Push event: 5
  • Pull request event: 2
Last Year
  • Issues event: 2
  • Watch event: 3
  • Issue comment event: 1
  • Push event: 5
  • Pull request event: 2

Committers

Last synced: almost 3 years ago

All Time
  • Total Commits: 151
  • Total Committers: 4
  • Avg Commits per committer: 37.75
  • Development Distribution Score (DDS): 0.172
Top Committers
Name Email Commits
Michael Belitz m****6@g****m 125
Caitlin J Campbell c****l@u****m 18
mbelitz 4****z@u****m 7
Daijiang Li d****1@u****u 1
Committer Domains (Top 20 + Academic)
ufl.edu: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 2
  • Total pull requests: 9
  • Average time to close issues: 3 days
  • Average time to close pull requests: 2 days
  • Total issue authors: 1
  • Total pull request authors: 2
  • Average comments per issue: 0.5
  • Average comments per pull request: 0.11
  • Merged pull requests: 9
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 2
  • Average time to close issues: 12 minutes
  • Average time to close pull requests: 2 minutes
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 1.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • cjcampbell (2)
Pull Request Authors
  • cjcampbell (8)
  • daijiang (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 281 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 4
  • Total maintainers: 1
cran.r-project.org: phenesse

Estimate Phenological Metrics using Presence-Only Data

  • Versions: 4
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 281 Last month
Rankings
Forks count: 14.9%
Stargazers count: 24.2%
Dependent packages count: 29.8%
Average: 35.1%
Dependent repos count: 35.5%
Downloads: 71.5%
Maintainers (1)
michaelbelitz06@gmail.com
Last synced: 7 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.5 depends
  • boot * imports
  • fitdistrplus * imports
  • stats * imports
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests