rfishbc
This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.
Science Score: 33.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 3 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
✓Committers with academic emails
1 of 4 committers (25.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (19.8%) to scientific vocabulary
Keywords
Repository
This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.
Basic Info
- Host: GitHub
- Owner: fishR-Core-Team
- Language: R
- Default Branch: master
- Homepage: https://fishr-core-team.github.io/RFishBC/
- Size: 163 MB
Statistics
- Stars: 13
- Watchers: 3
- Forks: 1
- Open Issues: 5
- Releases: 18
Topics
Metadata Files
README.md
RFishBC 
The RFishBC package helps fisheries scientists collect measurements from calcified structures and back-calculate estimated lengths at previous ages. RFishBC is intended to replace much of the functionality provided by the now out-date fishBC software.
Use
General desriptions for using RFishBC are under the Vignettes tab at the top of this page. I suggest at least quickly reading each vignette to get an overall feel for RFishBC and then following the workflow suggestions in the last vignette. Detailed descriptions for each function are under the Reference tab at the top of that page.
Installation
The most recent stable version (on CRAN) of RFishBC may be installed with
r
install.packages("RFishBC")
The most recent development version may be installed from GitHub with
r
if (!require('remotes')) install.packages('remotes'); require('remotes')
remotes::install_github('fishr-core-team/RFishBC')
You may need to have R Tools installed on your system to use the two lines above. See the instructions for (R Tools for Windows or R Tools for Mac OS X). Additionally, you may need the X11 graphics functionality if using Mac OS.
Questions / Comments / Problems or Contributions
Report questions, comments, or bug reports on the issues page.
We are always looking for others to contribute to RFishBC. Please feel free to make a pull request via GitHub or to contact the maintainers.
Please adhere to the Code of Conduct.
Owner
- Name: fishR Core Team
- Login: fishR-Core-Team
- Kind: organization
- Location: United States of America
- Repositories: 5
- Profile: https://github.com/fishR-Core-Team
GitHub Events
Total
- Watch event: 1
Last Year
- Watch event: 1
Committers
Last synced: 6 months ago
Top Committers
| Name | Commits | |
|---|---|---|
| Derek Ogle | d****c@u****m | 180 |
| Derek Ogle | d****e@n****u | 61 |
| Derek Ogle | d****k@d****m | 19 |
| Derek Ogle | D****1@g****m | 11 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 43
- Total pull requests: 21
- Average time to close issues: 4 months
- Average time to close pull requests: about 2 hours
- Total issue authors: 5
- Total pull request authors: 1
- Average comments per issue: 1.4
- Average comments per pull request: 0.48
- Merged pull requests: 20
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- droglenc (38)
- adospace (2)
- LBRUDNR (1)
- smithmillerm (1)
- Otoliths (1)
Pull Request Authors
- droglenc (20)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 3
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Total downloads:
- cran 190 last-month
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Total dependent packages: 0
(may contain duplicates) -
Total dependent repositories: 1
(may contain duplicates) - Total versions: 41
- Total maintainers: 1
proxy.golang.org: github.com/fishR-Core-Team/RFishBC
- Documentation: https://pkg.go.dev/github.com/fishR-Core-Team/RFishBC#section-documentation
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Latest release: v0.2.7
published about 2 years ago
Rankings
proxy.golang.org: github.com/fishr-core-team/rfishbc
- Documentation: https://pkg.go.dev/github.com/fishr-core-team/rfishbc#section-documentation
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Latest release: v0.2.7
published about 2 years ago
Rankings
cran.r-project.org: RFishBC
Back-Calculation of Fish Length
- Homepage: https://fishr-core-team.github.io/RFishBC/
- Documentation: http://cran.r-project.org/web/packages/RFishBC/RFishBC.pdf
- License: GPL-3
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Latest release: 0.2.7
published about 2 years ago
Rankings
Maintainers (1)
Dependencies
- actions/checkout v2 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- JamesIves/github-pages-deploy-action v4.4.1 composite
- actions/checkout v3 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- actions/checkout v3 composite
- actions/upload-artifact v3 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite
- R >= 3.2.0 depends
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- withr * imports
- FSA * suggests
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- testthat * suggests