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Open Source Science

Scientific Software
Updated 9 months ago

Nextclade — Peer-reviewed • Rank 14.3 • Science 95%

Nextclade: clade assignment, mutation calling and quality control for viral genomes - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 9 months ago

Multilocus sequence typing by blast from de novo assemblies against PubMLST — Peer-reviewed • Rank 6.1 • Science 100%

Multilocus sequence typing by blast from de novo assemblies against PubMLST - Published in JOSS (2016)

Scientific Software · Peer-reviewed
Scientific Software
Updated 9 months ago

CheckQC — Peer-reviewed • Rank 13.0 • Science 93%

CheckQC: Quick quality control of Illumina sequencing runs - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Scientific Software
Updated 9 months ago

SaffronTree — Peer-reviewed • Rank 5.1 • Science 98%

SaffronTree: Fast, reference-free pseudo-phylogenomic trees from reads or contigs. - Published in JOSS (2017)

Biology (39%)
Scientific Software · Peer-reviewed