https://github.com/bodenmillergroup/histocat
Histology Topography Cytometry Analysis Toolbox
https://github.com/bodenmillergroup/cytomapper_publication
See static website at https://bodenmillergroup.github.io/cytomapper_publication/
https://github.com/bodenmillergroup/cisi_imc
scripts for Tsuyoshi's CISI_IMC project
https://github.com/bodenmillergroup/scpathology_publication
The Single-Cell Pathology Landscape of Breast Cancer
https://github.com/bodenmillergroup/imcdatasets
ExperimentHub collection of imaging mass cytometry datasets
https://github.com/bodenmillergroup/imcyto
UNDER CONSTRUCTION: Image Mass Cytometry analysis pipeline
https://github.com/bodleian/archiox-mirador-plugin
An experimental plugin to display depth information captured with Lucida or Selene scanners from FactumARTE. However, the plug-in can present any normal map/albedo map combination produced from any technique.
https://github.com/bodleian/iiif-static-choices
A IIIF static tile and manifest generator built using Python to generate IIIF tiled images and manifests. This application was put together to de-mystify the process of creating and hosting IIIF content and allow implementations without the need for specialist infrastructure such as imaging servers (iip) and manifest servers.
https://github.com/bodleian/ora_ocfl
The ORA OCFL project home, for the interactions between Hyrax/Sword2 and OCFL
https://github.com/boernerlab/famp_rna
Software Framework for FRET assisted structural modeling of RNA
https://github.com/bogdan-tanygin/ffans
Ferrofluid Aggregates Nano Simulator (FFANS) Project
https://github.com/bohdaq/neural-style
neural-style version which works on macOs
https://github.com/bohndieklab/end_to_end_phantom_qpat
Code to reproduce the paper
https://github.com/boidolr/mpy-esp8266
Building micropython for esp8266 & pybd boards