https://github.com/core-unit-bioinformatics/workflow-smk-ont-basecalling-correction
Workflow for the basecalling and error correction of ONT data.
https://github.com/core-unit-bioinformatics/.github
The CUBI public GitHub profile
https://github.com/core-unit-bioinformatics/tcellextrect
Fork of Bentham TcellExTRECT tool.
https://github.com/core-unit-bioinformatics/workflow-smk-varlociraptor-variant-calling
A forked Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of Varlociraptor.
https://github.com/core-unit-bioinformatics/reference-container
Build repository for reference container
https://github.com/cropgeeks/barleypantranscriptome
Barley pan-transcriptome paper -- analysis code
https://github.com/corentinlouis/expres
Exoplanetary and Planetary Radio Emission Simulator
https://github.com/coreylammie/badges
:pencil: Markdown code for lots of small badges :ribbon: :pushpin: (shields.io, forthebadge.com etc) :sunglasses:. Contributions are welcome! Please add yourse!
https://github.com/cornell-zhang/hcl-dialect
HeteroCL-MLIR dialect for accelerator design
https://github.com/cornell-zhang/hoga
Hop-Wise Graph Attention for Scalable and Generalizable Learning on Circuits
https://github.com/cornell-zhang/heterocl
HeteroCL: A Multi-Paradigm Programming Infrastructure for Software-Defined Heterogeneous Computing
https://github.com/cornell-zhang/allo-pldi24-artifact
Artifact evaluation of PLDI'24 paper "Allo: A Programming Model for Composable Accelerator Design"