https://github.com/animesh/humap
Hierarchical Uniform Manifold Approximation and Projection
https://github.com/animesh/hetionet
Hetionet: an integrative network of disease
https://github.com/animesh/hdwgcna
High dimensional weighted gene co-expression network analysis
https://github.com/animesh/graphormer
Graphormer is a deep learning package that allows researchers and developers to train custom models for molecule modeling tasks. It aims to accelerate the research and application in AI for molecule science, such as material design, drug discovery, etc.
https://github.com/animesh/gosling.js
Grammar of Scalable Linked Interactive Nucleotide Graphics
https://github.com/animesh/gfastats
A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.
https://github.com/animesh/gget
🧬 gget enables efficient querying of genomic reference databases to support the analysis of sequencing data.
https://github.com/animesh/git-re-basin
Code release for "Git Re-Basin: Merging Models modulo Permutation Symmetries"
https://github.com/animesh/genrisk
A python package that implements gene-based scoring system, association analysis, visualization, and machine learning models
https://github.com/animesh/genomicsupersignature
Interpretation of RNAseq experiments through robust, efficient comparison to public databases
https://github.com/animesh/gentrl
Generative Tensorial Reinforcement Learning (GENTRL) model
https://github.com/animesh/generic-expression-patterns
Distinguishing between generic and experiment-specific gene expression signals.