https://github.com/atpoint/siggenes
Diff. expression and signatures from OMICS data. Personal use, no warranty.
ecs_codes
This repository contains the codes used to constuct Euler Characteristic Surface using coarse-graining method and as well as alpha simplicial complex.
fair-amd-oct-paper-code
Code associated with the paper on FAIR assessment of AMD-related datasets containing OCT data
totenj
Calculate DMI coefficients to arbitrary neighbor from DFT total energy.
https://github.com/atrcheema/ml_tutorials
random tutorials regarding deep learning
https://github.com/37han/websea.github.io
(Pre-release) An easy-to-use, flexible website template for labs, with automatic citations, GitHub tag imports, pre-built components, and more
parrot-gpt
Parrot GPT is a Python library that enables you to convert bibliographic metadata between various schemas using OpenAI’s large language models through its API. The library is not limited to specific schemas, but currently, some restrictions apply to input and output schemas.
https://github.com/atrcheema/etutil
calculate evapotranspiration from monthly to sub-hourly time step
https://github.com/atrcheema/tabulight
exploratory data analysis for tabular or 1D time series data
chimeramix
Official PyTorch implementation for ChimeraMix: Image Classification on Small Datasets via Masked Feature Mixing (IJCAI 2022)
atacseq_pipeline
Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.