https://github.com/csbiology/bio-bte-10-l-4
Project suggestions for the project work for Wissenschaftliche Programmierung für Biolog*innen (BIO-BTE-10-L-4)
https://github.com/csc-uw/graphiit
Personal utilities for building PyPhi networks that need to be large and/or malleable.
https://github.com/csc-uw/ecephys
Python extracellular electrophysiology tools
https://github.com/csdms/ciceseg-contrib
Community contributions to the CICESEG Landslide Modeling Portal
https://github.com/cschell/pytorch-lightning
The lightweight PyTorch wrapper for high-performance AI research. Scale your models, not the boilerplate.
https://github.com/cschoel/apicadabri
Apicadabri is a magical set of tools to interact with APIs from a data scientist's perspective to "just get the damn data"™.
https://github.com/cschoel/shm-conduction
Modular version of the cardiac conduction system in the Seidel-Herzel-model (SHM) in Modelica
https://github.com/cschoel/entro-py
Time series entropy measures implemented with numpy
https://github.com/cschoel/inamo
Modelica re-implementation of the one-dimensional mathematical model of the atrioventricular node by Inada et al. (2009)
https://github.com/cschoel/hh-modelica
An understandable, extensible and reusable implementation of the Hodgkin-Huxley equations using Modelica
https://github.com/cschpc/lustre-stripe-testing
Quick MPI-IO code for testing performance with Lustre striping
https://github.com/cschpc/icon-scc24
Fork of ICON for Student CLuster Competition in SC24
https://github.com/cschpc/mask2former-hip
Mask2Former HIP porting for University of Helsinki