https://github.com/apetkau/nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
https://github.com/apetkau/fetchngs
Pipeline to fetch metadata and raw FastQ files from public and private databases
https://github.com/apetkau/pangolin
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
https://github.com/apetkau/mab_mabscessus
The MAB MLST Scheme for Mycobacterium absecssus
https://github.com/apetkau/irida
Canada’s Integrated Rapid Infectious Disease Analysis Platform for Genomic Epidemiology
https://github.com/apetkau/docker-galaxy-stable
:whale::bar_chart::books: Docker Images tracking the stable Galaxy releases.
https://github.com/aphalo/photobiologysensors
Spectral response and other data about light sensors
https://github.com/aphalo/as7343
Simulation of channel responses of AS7343 spectral sensor.
https://github.com/aphalo/photobiologyplants
R package part the R for Photobiology suite
https://github.com/aphalo/weather-viikki-field-2024
R scripts and logger programs used to prepare data for publication
https://github.com/aphalo/rfr-viikki-field-pre2024
R scripts and logger programs for data publication
https://github.com/aphalo/photobiologyinout
R package for data exchange in and out of the R for Photobiology suite of packages