Projects with .zenodo.json

Updated 10 months ago

fmriprep • Rank 19.1 • Science 49%

fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

bids brain-imaging fmri fmri-preprocessing image-processing neuroimaging

Updated 10 months ago

smriprep • Rank 16.8 • Science 49%

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

image-processing image-registration image-segmentation mri structural-mri surface-reconstruction

Updated 10 months ago

calcam • Rank 12.0 • Science 46%

Python package of spatial calibration tools for science & engineering camera systems.

calibration-toolbox camera-calibration image-processing science-research scientific-visualization

Updated 10 months ago

motila • Science 67%

Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data

image-processing image-segmentation microglia microglial-motility motility motility-analysis neuroscience python

Updated 10 months ago

deeptrack • Science 67%

DeepTrack2 is a modular Python library for generating, manipulating, and analyzing image data pipelines for machine learning and experimental imaging.

biophysics computational-pipelines data-augmentation deep-learning image-processing machine-learning microscopy optics photonics soft-matter superresolution