Projects

Updated 10 months ago

mzcore • Rank 5.9 • Science 67%

A Rust library for peptide centric mass spec calculations centered around ProForma and complex theoretical fragmentation

chemistry cross-linking glycans mass-spectrometry proforma proteomics rust

Updated 10 months ago

annotator • Rank 4.5 • Science 44%

A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.

cross-linking glycans mass-spectrometry proteomics

Updated 10 months ago

https://github.com/bzhanglab/xlranker • Science 26%

prioritization tool for ppi-xl data

bioinformatics cross-linking ppi ppi-xl protein-protein-interaction

Updated 10 months ago

msannika_csm_annotation • Science 65%

Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.

annotation cross-linking crosslinker crosslinking doublet-ions fragment-ions mass mass-spectrometry ms2 ms3 proteomics python spectrometry tandem-ms xlms

Updated 10 months ago

msannika • Science 39%

MS Annika is a crosslink search engine based on MS Amanda, aimed at identifying crosslinks of cleavable and non-cleavable crosslinkers from MS2 and MS3 spectra.

cross-linking crosslinker crosslinking mass mass-spectrometry ms2 ms3 proteomics search-engine spectrometry tandem-ms xlms

ecosyste.ms

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Open Source Science

mzcore • Rank 5.9 • Science 67%

annotator • Rank 4.5 • Science 44%

https://github.com/bzhanglab/xlranker • Science 26%

msannika_csm_annotation • Science 65%

msannika • Science 39%