Scientific Software
Updated 6 months ago

PyBADS — Peer-reviewed • Rank 11.6 • Science 93%

PyBADS: Fast and robust black-box optimization in Python - Published in JOSS (2024)

Updated 6 months ago

surprisal • Rank 10.1 • Science 54%

A unified interface for computing surprisal (log probabilities) from language models! Supports neural, symbolic, and black-box API models.

Updated 6 months ago

https://github.com/acerbilab/ibs • Rank 4.2 • Science 33%

Inverse binomial sampling for efficient log-likelihood estimation of simulator models in MATLAB

Updated 6 months ago

https://github.com/astrazeneca/diffabxl • Science 49%

The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs", formerly titled "Benchmarking Generative Models for Antibody Design".

Updated 6 months ago

https://github.com/acerbilab/bads • Science 33%

Bayesian Adaptive Direct Search (BADS) optimization algorithm for model fitting in MATLAB

Updated 6 months ago

https://github.com/acerbilab/pyibs • Science 36%

Inverse binomial sampling for efficient log-likelihood estimation of simulator models in Python