Projects | Open Source Science

Projects

Updated 9 months ago

chipseq • Rank 8.4 • Science 77%

ChIP-seq peak-calling, QC and differential analysis pipeline.

chip chip-seq chromatin-immunoprecipitation macs2 nextflow nf-core peak-calling pipeline workflow

Updated 9 months ago

clipseq • Rank 6.4 • Science 77%

CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.

clip clip-seq nextflow nf-core peak-calling pipeline rna-rbp-interactions workflow

Updated 9 months ago

cnr-flow • Rank 1.6 • Science 64%

CUT&RUN-Flow, A Nextflow pipeline for QC, tag trimming, normalization, and peak calling for data from CUT&RUN experiments.

chip-seq-pipelines cutandrun cutandrun-seq cutrun genomics nextflow peak-calling