GitHub
spin-dependent-5th-force-limits
This dataset compiles results from existing exotic boson searches, with a specific focus on the fifth force—particularly the spin-dependent fifth force (SDFF). It is intended as a live platform to provide researchers in the field with convenient access to relevant data.
jaipur
A short, introduction to using Python and Jupyter to interact with geo-data.
https://github.com/dfornika/amrhike
Proof-of-concept for storing and querying harmonized AMR Genomic Analysis Results in datahike
qasports-dataset-scripts
Scripts used to generate the (Question-Answering) QASports2 Dataset
bacqc
bacQC is a bioinformatics analysis pipeline for assessing the quality of bacterial isolate sequence data
open-science-checklists
Checklists produced by the Open Science Team at SciLifeLab Sweden for guidance on compliance with FAIR principles.
yolov3-tilapia-fish-freshness-evaluation-system
Updated fork of YOLOv3 and Grabcut System for Tilapia Gill Identification
makefile-support-for-help
Supporting 'help' as a target within Makefiles for self-documentation
cycling-kinematic
Python tool for the analysis of lower limb 3D kinematics during cycling across multiple power levels. Designed for motion capture recordings from Contemplas™ or similar systems.
cpg0017-rohban-pathways-data
Image based profiles regenerated for cpg0017-rohban-pathways (TA-ORF) using 2023 workflow. As found in the cellpainting-gallery.
npl
The NanoParticleLibrary (NPL) is a Python library for simulating and optimizing nanoparticle structures, built on ASE.
langchain-chatbot
AI Chatbot for analyzing/extracting information from data in conversational format.
information_disclosure_searchtools
A Python tool developed by Hafid Fajar, co-founder of Garuda Cyberthreat. It's specifically designed for full-power information disclosure vulnerability scanning, quickly and efficiently uncovering exposed sensitive data.
pace_oci_conversion
R scripts for converting PACE LandVI data from NetCDF to GeoTIF
eVAS
eVAS: A user-friendly electronic Visual Analogue Scale - Published in JOSS (2025)
skder
skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.
carbon-aware-nextflow-on-k8s
Run carbon-aware Nextflow pipelines on Kubernetes using real-time ElectricityMap data to reduce emissions from compute-heavy tasks.
@hugoalh/range-iterator
An ECMAScript (JavaScript & TypeScript) module to iterate between range.
stats-strided-wasm-dmeanors
Calculate the arithmetic mean of a double-precision floating-point strided array using ordinary recursive summation.
transform-emr
This model is a decoder transformer based model aiming to model events predictions from EMR records as a sequential text generation problem. This project is a part of my thesis research.
dynamic-consent-management
Dynamic Consent Management of Speakers in Voice Assistant Systems
ucd-agg-website
Laboratory website for the University College Dublin Animal Genomics Group (UCD-AGG)
constructive-konig
Coq artifact for "Constructive substitutes for König's lemma"
hicberg
Statistical profiling based program for contact (Hi-C) and pair ended genomic data reconstruction
fairroot
C++ simulation, reconstruction and analysis framework for particle physics experiments
https://github.com/jageo/mace-mp-03b-phonon-benchmark
Phonon calculations and evaluation for the MACE MP-0b3 model
nagios-plugin-perl-templates
A set of templates for Nagios check scripts written in Perl.
lightworks
Lightworks is an open-source Python SDK for photonic quantum computing.
StochasticSeriesExpansion
General purpose stochastic series expansion quantum Monte Carlo code.
emolysis
[ACII Demo] Emolysis: A Multimodal Open-Source Group Emotion Analysis and Visualization Toolkit
corticalfolding_ad_aging
Description of the procedures and analysis present in de Moraes et al., in submission. This manuscript was included as Manuscript 1, Independent morphological variables correlate to aging, Mild Cognitive Impairment, and Alzheimer's Disease, at the Doctorate Thesis presented to the Programa de Pós-Graduação em Ciência Médicas at the Instituto D’Or de Pesquisa e Ensino as a partial requirement to obtain the Doctorate Degree. The part of the data used here cannot be shared due to restrictions of the Ethic Comittee. Data can be shared upon reasonable request to the corresponding author. To fullfil these limitation, we will generate random data to simulate the results. The data used at the Supplementary Information are processed data from AHEAD and AOMIC (PIOP1 and PIOP2) (to be uploaded). Get in touch with us (fernandahmoraes@gmail.com) in case any help is needed, our aim is to improve the code as needed! Please cite this work if used: DOI insert DOI code
quan_ultralytics
Quaternion Approximate Networks Ultralytics Repository. Implementation of QUAN with YOLO.
sin
Pulls images from the trusted namespace in dockerhub, runs a security scan, and builds it using singularity with optimal settings for mutable .sif containers along with a command tree allowing for standardized shell and execution. For remote execution for NAT access, memorizes the default credentials to use simplifying access from edge devices
https://github.com/jageo/gaussian_wave_packet
Repo to simulate time-evolution of a Gaussian wave packet
llms_from_scratch
A code along Sebastian Raschka book how to build an llm from scratch
assembly_amr
This is a Nextflow pipeline for analyzing whole-genome sequencing data from bacterial isolates.
chamois-tool
Chemical Hierarchy Approximation for secondary Metabolism clusters Obtained In Silico.
