GitHub
pipelines_inmegen
Flujos de trabajos desarrollados y automatizados en el Intituto Nacional de Medicina Genómica para el procesamiento de datos genómicos y transcriptómicos.
drugdeliverybuongiornopimplefoam
An OpenFOAM's solver for drug delivery and unsteady forced convection heat transfer of nanofluid using the Buongiorno model to consider nanoparticle distribution.
hicup-plus
Hi-C data processing pipeline (with Dragen, HiSAT2, or STAR aligner)
earnings
Equity earnings Python package (confirmed calendar, news articles, earnings transcripts, ...)
fsquadra
Fast detection of repackaged Android applications based on the comparison of resource files included into the package.
tsdetect
TSDetect is an open-source test smell detection tool. TSDetect is available as an IntelliJ plugin and command-line tool.
icse-seip2025-anomaly-detector-public
This repository contains the code implementation for the ICSE SEIP 2025 paper titled "Anomaly Detection in Large-Scale Cloud Systems: An Industry Case and Dataset."
how-to-doc-guidelines
How-to use the Australian BioCommons documentation guidelines
pratical-session-nlp-for-one-health-murdoch-mood
Pratical session NLP For One Health - Murdoch Mood
highlighting-errors-and-correcting-hec-
This code walks the user through the process of correcting training data labels and cutting out erroneous data
eucanscreenwp5_demo_aspire
Demo version for the 2025_02_06 meeting. The tools are shown with an example model and a simple R script.
tiapn-template
Template para a disciplina de TI: APLICAÇÕES PARA PROCESSOS DE NEGÓCIOS
clubes_de_ciencias_sdms
Material for 1 week course in species distribution modeling using R notebooks, MaxEnt, and GIS packages.
perihpx
Implementation of finite element and finite difference approximation of Nonlocal models
pmv-si-2023-2-pe5-t4-t5-grp04
pmv-si-2023-2-pe5-t4-t5-grp04 created by GitHub Classroom
bua-vivo-ontology-extensions
Extensions to VIVO ontologies describing entities in the German academic domain
mapping-pipeline
This repo will combine all the steps of mapping EHR data to the CAPACITY registry in one big docker-compose file
kms-nl
tekstboek Kwantitatieve Methoden en Statistiek (Nederlandstalige versie, NL), beschikbaar via https://hugoquene.github.io/KMS-NL/
retrieveseq
RetrieveSeq is a GUI application that performs batch download of how many gene sequences you wish from Ensembl database. Mind you: this application is still under development. Our goal is to increase its functions, as well as provide more database options.
mspconverter
A package to convert tandem mass spectra files from MSP to MGF format
https://github.com/alberto-santini/kpgf
The 0-1 Knapsack Problem with Group Fairness
https://github.com/alcrene/emdcmp
Original implementation of the EMD (empirical model discrepancy) model comparison criterion
https://github.com/alexandrovlab/sigprofilersimulator
SigProfilerSimulator allows realistic simulations of mutational patterns and mutational signatures in cancer genomes. The tool can be used to simulate signatures of single point mutations, double point mutations, and insertion/deletions. Further, the tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
https://github.com/algebraicjulia/decapodes.jl
A framework for composing and simulating multiphysics systems
https://github.com/algebraicjulia/acsets.jl
ACSets: Algebraic databases as in-memory data structures
https://github.com/aliireza/slice-aware
Slice-aware Memory Management - Exploiting NUCA Characteristic of LLC in Intel Processors
https://github.com/alleninstitute/patchseq_human_l1
supporting data and code for human L1 patchSeq manuscript
https://github.com/allfed/allfed-repository-template
Use this as a template for a new project: https://medium.com/programming-lite/repository-templates-in-github-why-how-75b1d1bd43f2
https://github.com/allfed/water-access
Global analysis of freshwater access by walking or cycling in the event of catastrophic infrastructure loss.
https://github.com/aloftdata/bird-migration-flow-visualization
Bird migration flow visualization
https://github.com/alondmnt/joplin-plugin-tag-navigator
A PKM system to organise, search, browse and convert inline tags, front matter and tasks in Joplin
