GitHub
@stdlib/ndarray-base-strides2order
Determine the order of a multidimensional array based on a provided stride array.
lkh
A super simple Python wrapper for the constrained traveling salesman and vehicle routing problem solver LKH-3.
org.tinfour:Tinfour
Delaunay and Constrained Delaunay Triangulations in Java, providing high-performance utilities for modeling surfaces with support for Lidar LAS files, Digital Elevation Models (DEM), finite element analysis, path planning, natural neighbor interpolation, and other applications of Triangulated Irregular Networks (TIN)
quokka
Two-moment AMR radiation hydrodynamics (with self-gravity, particles, and chemistry) on CPUs/GPUs for astrophysics
laicrypto
LAI is a promising post-quantum cryptosystem based on isogenies of elliptic curves over lemniscate lattices, offering resistance against quantum-capable adversaries.
@stdlib/stats-base-dists-chisquare-skewness
Chi-squared distribution skewness.
@stdlib/stats-base-dists-gamma-logpdf
Gamma distribution logarithm of probability density function (PDF).
clarity-upscaler
Clarity AI | AI Image Upscaler & Enhancer - free and open-source Magnific Alternative
predicate_learning
Code for paper "On Learning Scene-aware Generative State Abstractions for Task-level Mobile Manipulation Planning"
SODAR Core
SODAR Core: a Django-based framework for scientific data management and analysis web apps - Published in JOSS (2020)
cryosphere-links
This is a link list with awesome data, models, and tools around the cryosphere.
moldrug
moldrug (AKA mouse) is a Python package for drug-oriented optimization on the chemical space
@stdlib/stats-base-dists-chisquare-pdf
Chi-squared distribution probability density function (PDF).
@stdlib/stats-base-dists-binomial-pmf
Binomial distribution probability mass function (PMF).
json-to-usv
JavaScript Object Notation (JSON) to Unicode Separated Values (USV) Rust crate
neurodatapub
NeuroDataPub is an open-source neuroimaging dataset publication tool built on top of Datalad that helps NCCR-Synapsy members in the task of managing their dataset with Datalad and referencing them to the NCCR-SYNAPSY GitHub organization.
revisit-severson-et-al
Repository for the paper "Statistical learning for accurate and interpretable battery lifetime prediction"
https://github.com/firefly-cpp/uarmsolver
universal Association Rule Mining Solver
https://github.com/jcmcnch/easv-pipeline-for-515y-926r
This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools
pysbf2
Python library for parsing and generating Septentrio SBF GPS/GNSS protocol messages.
@stdlib/stats-base-dists-negative-binomial-pmf
Negative binomial distribution probability mass function (PMF).
AgentPy
AgentPy: A package for agent-based modeling in Python - Published in JOSS (2021)
nmrformd
NMRforMD is a python script for the calculation of NMR relaxation time T1 and T2 from molecular dynamics trajectory file.
scanneo2
Snakemake-based computational workflow for neoantigen prediction from diverse sources
lux-design-s1
Home to the design and engine of the @Lux-AI-Challenge Season 1, hosted on @kaggle
unsupervised_analysis
A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.
gepa
This repository contains the code for the EPA U.S. gridded methane greenhouse gas inventory (gridded GHGI)
delineator
Fast, accurate watershed delineation using hybrid vector- and raster-based methods and data from MERIT-Hydro
@stdlib/ndarray-base-assert-is-buffer-length-compatible
Determine if a buffer length is compatible with provided ndarray meta data.
PyBioPAX
PyBioPAX: biological pathway exchange in Python - Published in JOSS (2022)
greenexp_r
This is a R toolkit and developer version package to estimate multidimensional aspects of greenness and nature exposure, such as availability, accessibility and visibility using various geospatial data and models
https://github.com/althonos/torch-treecrf
A PyTorch implementation of Tree-structured Conditional Random Fields.
https://github.com/algebraicjulia/petri.jl
A Petri net modeling framework for the Julia programming language
usv-to-json
Unicode Separated Values (USV) to JavaScript Object Notation (JSON) Rust crate
syncopy
Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data
https://github.com/forieux/qmm
Python Quadratic Majorization-Minimization (MM) optimization algorithms of half-quadratic criteria. Inverses problems, image restoration, denoising, ...
pyGPGO
pyGPGO: Bayesian Optimization for Python - Published in JOSS (2017)
https://github.com/cosima/access-om2-1-025-010deg-report
Technical report detailing the ACCESS-OM2 coupled ice and ocean global model.
https://github.com/arjunsavel/scope
Simulating high-resolution cross-correlation spectroscopy of exoplanet atmospheres.