GitHub
haploidsprucemap
Scripts and data input files for Norway spruce genetic maps from haploid megagametophyte data. Maps and results are presented in Bernhardsson et al. (2018). "An ultra-dense haploid genetic map for evaluating the highly fragmented genome assembly of Norway spruce (Picea abies) "
hydropower-fatigue-damage-reduction
Code for EPFL PTMH & SDSC's paired-hydro project
pid4cat-model
Handle-based PIDs with a rich LinkML metadata model for resources in catalysis (PID4Cat)
spectacoular
Extension module for Acoular for the realization of microphone array GUI applications with minimal programming effort.
portal-admin
Sistema de gerenciamento de orçamentos, solicitações de serviços, fornecedores e clientes.
fuzzy-logic-toolkit
A mostly MATLAB-compatible fuzzy logic toolkit for Octave.
lambdanative-and-fdroid
Introduction to building and distributing Android applications
ultralystics-baseline
Based on the official Ultralytics repository, I've added some of my own tricks to serve as a baseline for various comparative experiments in object detection.
intro-tableau
An introductory lesson on data visualization using Tableau Public. Learners create charts, explore datasets, and build dashboards—no prior experience required.
stochasticvehiclescheduling.jl
Application of InferOpt.jl to the Stochastic Vehicle Scheduling Problem
mumu
C++ implementation of lulu, a R package for post-clustering curation of metabarcoding data
evexplorer
nf-core/evexplorer is a pipeline for analyzing RNA data from extracellular vesicles, compatible with technologies such as nextflex, comboSeq, and ONT with further support forthcoming. evexplorer handles QC, expressed region detection, library size normalization and Differential RNA Expression (DRE)
macchiato
Macchiato is a Petri Nets implementation for Python 3 with a focus of usability and scriptability.
fair_genome_indexer
Download and index Ensembl sequences and annotations, remove non-canonical chromosimes, remove low TSL, index with multiple tools
VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer
VSMOD: A Vessel Segmentation and MODelization plugin for 3D Slicer - Published in JOSS (2025)
mlflow-cnn
Galaxy Redshift Estimation Using Convolutional Neural Networks with MLflow Tracking
awesome-arm-in-smart-agriculture
A collection of literature on the use of association rule mining methods in smart agriculture
ai-attendance-system
An AI-powered attendance system using YOLOv5 for face detection and recognition.
sixarm_ruby_sentry
SixArm.com » Ruby » Sentry simple monitorning of URI links, DNS names, etc.
stars-reproduce-johnson-2021
Assessing the computational reproducibility of Johnson et al. 2021 as part of STARS.
daedalus
[UNDER DEVELOPMENT] R package implementing the DAEDALUS model for projecting and optimising health, social, and economic costs of a pandemic.
wneq
wneq is a Python package for computing nuclear equilibria in nucleosynthesis.
sparsematrixcolorings.jl
Coloring algorithms for sparse Jacobian and Hessian matrices
best-practice-documentation
The best-practice documentation of SDSC (mirror from Gitlab)
CloudCovErr
Pipeline for debiasing and improving error bar estimates for photometry on top of structured/filamentary background.
stats-strided-dsvariance
Calculate the variance of a single-precision floating-point strided array using extended accumulation and returning an extended precision result.
hides
Linux Loadable Kernel Module Rootkit for Linux Kernel 5.x and 6.x on x86_64, hides files, hides process, hides bind shell & reverse shell…
guida-per-tour-audulti-musei-civici
Guida per spiegare le Opere dei Musei Civici agli Adulti
dog-behavior-framework
A trust-based behavioural system for dogs, inspired by emotional logic and communication.
stats-array-stdevch
Calculate the standard deviation of an array using a one-pass trial mean algorithm.
intro-to-genome-browsers
Melbourne Bioinformatics Introduction to Genome Browsers workshop materials.
geoquery
This is a read-only mirror of the git repos at https://bioconductor.org
m4.4_sciwin_client
🦀 SciWIn Client: Reproducible computational Workflows made easy!
modified_llm_eval_harness
cloned from LLM eval harness, I added some datasets (MultiJail and XSTest) for my bachelor's thesis.
sphere-space-station-earth-one-and-beyond
Sphere Space Station Earth ONE and Beyond
2020-11-06-tudelft
Webpage for hypothetical Software Carpentries workshop at TU Delft
in-silico-protocols-4ml
Semantically enriched in-silico protocols for ML experiments to improve FAIRness, transparency and reproducibility
variantbenchmarking
Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research
panoramaseq
a pipeline to process sequencing based spatial transccriptomics data from in-situ arrays