GitHub

https://github.com

Updated 8 months ago

https://github.com/kul-optec/c_proximal_functions • Science 13%

library of functions with the proximal function in C.

Updated 8 months ago

https://github.com/kul-optec/drn • Science 13%

Newton-type Douglas-Rachford splitting method and ADMM for structured nonconvex optimization

Updated 8 months ago

https://github.com/kul-optec/nmpc-codegen-python • Science 13%

Python version of nmpc-codegen

Updated 8 months ago

https://github.com/kul-optec/pantr-cdc2023-experiments • Science 26%

PANTR: A proximal algorithm with regularized Newton updates for nonconvex constrained optimization

Updated 8 months ago

https://github.com/kul-optec/panoc • Science 13%

Fast solver for nonlinear model predictive control

Updated 8 months ago

https://github.com/kul-optec/panoc.jl • Science 26%

Newton-type accelerated proximal gradient method in Julia

Updated 8 months ago

https://github.com/kul-optec/dc_dc_simulator • Science 13%

Simulator for DC-DC power converters

Updated 8 months ago

https://github.com/kuleshov-group/awesome-discrete-diffusion-models • Science 44%

A curated list for awesome discrete diffusion models resources.

Updated 8 months ago

https://github.com/kuleshov-group/bd3lms • Science 44%

Block Diffusion: Interpolating Between Autoregressive and Diffusion Language Models

Updated 8 months ago

https://github.com/kuleshov-group/caduceus • Science 57%

Bi-Directional Equivariant Long-Range DNA Sequence Modeling

Updated 8 months ago

https://github.com/kuleshov-group/discrete-diffusion-guidance • Science 18%

Simple Guidance Mechanisms for Discrete Diffusion Models

Updated 8 months ago

https://github.com/kuleshov-group/genomics-lrb-viztool • Science 21%

Visualization of results on Genomics Long-Range Benchmark by annotations

Updated 8 months ago

https://github.com/kuleuven-cosic/leuvenshtein-db-demo • Science 26%

Database demo of the Leuvenshtein Algorithm

Updated 8 months ago

https://github.com/kuleuven-cosic/3_3_isogenies • Science 26%

Magma code to efficiently compute chains of (3,3)-isogenies

Updated 8 months ago

https://github.com/kuleuven-cosic/2r-pi-vss • Science 26%

Source code for implementations of round-optimal VSS schemes presented in the paper "On Round-Optimal Computational VSS" published at CiC journal (https://cic.iacr.org/).

Updated 8 months ago

https://github.com/kuleuven-cosic/integral-cryptanalysis-characteristic-p • Science 26%

Supplementary material to the paper "Integral cryptanalysis in characteristic"

Updated 8 months ago

https://github.com/kuleuven-cosic/final • Science 26%

The fully homomorhic encryption scheme based on NTRU and LWE.

Updated 8 months ago

https://github.com/kuleuven-cosic/maestro • Science 26%

MAESTRO: Multi-party AES using Lookup Tables - Various oblivious AES protocols for passively and actively secure three-party secure computation

Updated 8 months ago

https://github.com/kuleuven-cosic/pi-vss • Science 13%

Source code for implementations of VSS schemes Π_P​ and Π_LA​ built by the general framework Π presented at PKC 2025 (https://eprint.iacr.org/2023/1669).

Updated 8 months ago

https://github.com/kuleuven-cosic/jitter_pipeline_trng • Science 13%

A pipelined TRNG ASIC implementation

Updated 8 months ago

https://github.com/kuleuven-cosic/flicker_entropy_model • Science 13%

An entropy model for the ERO-TRNG incorporating both white FM noise and flicker FM noise.

Updated 8 months ago

https://github.com/kuleuven-cosic/fast_batched_transciphering • Science 26%

This repository contains the code necessary to replicate the timings and other results from the paper "Fast Transciphering Via Batched And Reconfigurable LUT Evaluation"

Updated 8 months ago

https://github.com/kull-centre/_2024_theisen_proline_selection • Science 21%

Repository for code and data related to publication

Updated 9 months ago

PyDrugLogics: A Python Package for Predicting Drug Synergies Using Boolean Models • Science 93%

PyDrugLogics: A Python Package for Predicting Drug Synergies Using Boolean Models - Published in JOSS (2025)

Updated 8 months ago

MetaSpread: A cancer growth and metastatic spread simulation program in Python • Science 93%

MetaSpread: A cancer growth and metastatic spread simulation program in Python - Published in JOSS (2025)

Updated 7 months ago

mlr3extralearners: Expanding the mlr3 Ecosystem with Community-Driven Learner Integration • Science 95%

mlr3extralearners: Expanding the mlr3 Ecosystem with Community-Driven Learner Integration - Published in JOSS (2025)

Updated 7 months ago

mlgidGUI - an annotation program for 2D scattering data • Science 93%

mlgidGUI - an annotation program for 2D scattering data - Published in JOSS (2025)

Updated 7 months ago

STON: SofTware for petrOgraphic visualisatioN • Science 87%

STON: SofTware for petrOgraphic visualisatioN - Published in JOSS (2025)

Updated 10 months ago

optimeo • Science 67%

OPTIMEO is a package doubled by a web application that helps you optimize your experimental process by generating a Design of Experiment, generating new experiments using Bayesian Optimization (BO), and analyzing the results of your experiments using Machine Learning models.

Updated 8 months ago

PathFinder: A Matlab/Octave package for oscillatory integration • Science 93%

PathFinder: A Matlab/Octave package for oscillatory integration - Published in JOSS (2025)

Scientific Software
Updated 10 months ago

NeuroCAPs — Peer-reviewed • Science 93%

NeuroCAPs: A Python Package for Performing Co-Activation Patterns Analyses on Resting-State and Task-Based fMRI Data - Published in JOSS (2025)

Sociology (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

ActiSleep Tracker — Peer-reviewed • Science 93%

ActiSleep Tracker: a Python-based dashboard for adjusting automatic sleep predictions of actigraphy data - Published in JOSS (2025)

Earth and Environmental Sciences Computer Science (44%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 10 months ago

HINA — Peer-reviewed • Science 98%

HINA: A Learning Analytics Tool for Heterogenous Interaction Network Analysis in Python - Published in JOSS (2025)

Engineering
Scientific Software · Peer-reviewed
Updated 10 months ago

calzone-tool • Science 44%

Evaluating the Calibration of Probabilistic Models

Updated 7 months ago

PANKH: An unsteady potential flow solver for hovering airfoils • Science 93%

PANKH: An unsteady potential flow solver for hovering airfoils - Published in JOSS (2025)

Updated 10 months ago

elasticipy • Science 49%

A python toolkit to perform common tensor operations in Continuum Mechanics

Updated 10 months ago

eitprocessing • Science 44%

Software for electrical impedance tomography data loading, visualization and processing

Updated 10 months ago

sata • Science 67%

Updated 10 months ago

opensim-creator • Science 49%

A UI for building OpenSim models

Updated 5 months ago

PyMetric: A Geometry Informed Array Mathematics Package • Science 87%

PyMetric: A Geometry Informed Array Mathematics Package - Published in JOSS (2026)

Updated 5 months ago

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging • Science 87%

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging - Published in JOSS (2026)

Updated 5 months ago

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms • Science 87%

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms - Published in JOSS (2026)

Updated 10 months ago

vkcompviz • Science 44%

Vulkan image and data processing framework capable of running a cascade of compute shaders and displaying or storing the result.

Updated 10 months ago

constrainthg • Science 67%

General system simulation using constraint hypergraphs

Updated 10 months ago

itwinai • Science 44%

Advanced AI workflows for scientific digital twins

Updated 10 months ago

hermes-rheo • Science 49%

Python package designed to complement and extend the piblin library, offering a set of transforms tailored for analysis of rheological data

Updated 5 months ago

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery • Science 87%

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery - Published in JOSS (2026)

Updated 5 months ago

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch • Science 87%

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch - Published in JOSS (2026)

Updated 5 months ago

FAIRmaterials: Ontology Tools with Data FAIRification in Development • Science 87%

FAIRmaterials: Ontology Tools with Data FAIRification in Development - Published in JOSS (2026)

Updated 9 months ago

tools4rdf • Science 44%

Collection of tools for working with RDF data

Updated 5 months ago

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices • Science 90%

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices - Published in JOSS (2026)

Updated 5 months ago

aiida-aimall: A Python package for automating workflows for AIMAll software • Science 87%

aiida-aimall: A Python package for automating workflows for AIMAll software - Published in JOSS (2026)

Updated 5 months ago

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis • Science 87%

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)

Updated 5 months ago

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization • Science 87%

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)

Updated 5 months ago

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library • Science 87%

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library - Published in JOSS (2026)

Updated 4 months ago

A Python API for OTTER • Science 87%

A Python API for OTTER - Published in JOSS (2026)

Updated 10 months ago

c3dr • Science 67%

Read and write C3D motion capture data in R

Updated 10 months ago

rydiqule • Science 75%

Rydberg Sensor Interactive Quantum Physics Module

Updated 4 months ago

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles • Science 87%

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles - Published in JOSS (2026)

Updated 4 months ago

Dyad: a binary-star dynamics and statistics library for Python • Science 87%

Dyad: a binary-star dynamics and statistics library for Python - Published in JOSS (2026)

Updated 4 months ago

pyfive: A pure-Python HDF5 reader • Science 92%

pyfive: A pure-Python HDF5 reader - Published in JOSS (2026)

Updated 10 months ago

r.earthworks • Science 67%

An add-on tool for computational terrain modeling in GRASS

Updated 4 months ago

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows • Science 87%

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows - Published in JOSS (2026)

Updated 10 months ago

regularizedoptimization.jl • Science 67%

Algorithms for regularized optimization

Updated 4 months ago

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali • Science 87%

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali - Published in JOSS (2026)

Updated 4 months ago

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. • Science 92%

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. - Published in JOSS (2026)

Updated 4 months ago

KinOpt: A Python package for chemical kinetics analysis and optimization • Science 87%

KinOpt: A Python package for chemical kinetics analysis and optimization - Published in JOSS (2026)

Updated 4 months ago

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia • Science 87%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia - Published in JOSS (2026)

Updated 4 months ago

Graphorge: An open-source forge of graph neural networks • Science 87%

Graphorge: An open-source forge of graph neural networks - Published in JOSS (2026)

Updated 8 months ago

tangram, an open platform for modular, real-time air traffic management research • Science 96%

tangram, an open platform for modular, real-time air traffic management research - Published in JOSS (2025)

Updated 10 months ago

simulist • Science 67%

An R package for simulating line lists

Updated 10 months ago

powerfactory-tools • Science 75%

A Python toolbox for the (external) control of DIgSILENT PowerFactory.

Updated 3 months ago

baysc: An R package for Bayesian survey clustering • Science 87%

baysc: An R package for Bayesian survey clustering - Published in JOSS (2026)

Updated 3 months ago

biodiscvr: Biomarker Discovery Using Composite Value Ratios • Science 87%

biodiscvr: Biomarker Discovery Using Composite Value Ratios - Published in JOSS (2026)

Updated 3 months ago

Napari-3D-Counter: A manual cell counter for napari • Science 87%

Napari-3D-Counter: A manual cell counter for napari - Published in JOSS (2026)

Updated 3 months ago

PySGN: A Python package for constructing synthetic geospatial networks • Science 87%

PySGN: A Python package for constructing synthetic geospatial networks - Published in JOSS (2026)

Updated 3 months ago

evoxels: A differentiable physics framework for voxel-based microstructure simulations • Science 87%

evoxels: A differentiable physics framework for voxel-based microstructure simulations - Published in JOSS (2026)

Updated 3 months ago

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions • Science 87%

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions - Published in JOSS (2026)

Updated 3 months ago

Tissue Data Explorer: a website template for presenting tissue sample research findings • Science 95%

Tissue Data Explorer: a website template for presenting tissue sample research findings - Published in JOSS (2026)