GitHub
machine-learning-and-simulation
All the handwritten notes 📝 and source code files 🖥️ used in my YouTube Videos on Machine Learning & Simulation (https://www.youtube.com/channel/UCh0P7KwJhuQ4vrzc3IRuw4Q)
llm_from_scratch
I am using here just to share what I have been struggling to understand
chtc-containers
This repos contains information how to build, test, and run containers on CHTC. It contains examples of definition files for several bioinformatics softwares.
cdf2medmij-mapping-tool
Tool for transforming Cohort-study Data (CDF) into FHIR/MedMij compliant resource bundles
theofun
New home for Will Deakin's 'theofun' functionalities starting Dec/2024
trenchripper
Small library for analysis of mother machine data. Built to run on a SLURM cluster, but can be run locally.
esmvaltool-dask-paper
Additional material to reproduce the results of Schlund et al. (2025)
sitinglab
This repository contains a collection of user-friendly tutorials and guides for working with the Siting Lab data within the context of the reV model. The python code examples demonstrate the creation and transformation of Siting Lab data into reV compliant format as well as working with the reV model inputs and outputs.
dynaplex
DynaPlex is a software library for formulating and solving Markov Decision Problems, written primarily in C++20
st0245
Project for the second-semester course "Data Structures and Algorithms I" (ST0245) taught at EAFIT University (Medellín, Colombia) by prof Mauricio Toro
pressureexpansion
Symbolic computation framework for higher-order thermodynamic derivatives in mean-field thermal field theories. Includes methods for pressure expansion coefficients, speed of sound, and heat capacity, with applications to NJL models.
affiliation-matcher
Matcher for affiliations - link raw affiliation to ROR ids, country and RNSR
rpa-dmn-operation
This repo contains examples how DMN can be integrated in RPA tools.
tdabc-4-adac
Source code for the paper A TDA based classifier. Send it to Advances in Data analysis and classification
androidtvmalwaredataset
A dataset of 1000 features extracted from benign and malicious Android TV applications
greatlakes_coupledmodel_uncertainty
Coupled Lake-Atmosphere-Land Physics Uncertainties in a Great Lakes Regional Climate Model
fohr-net
Feature Optimization-guided High-precision and Real-time Metal Surface Defect Detection Network
hipas_av_segmentation
The supplementary code for the pulmonary artery-vein segmentation with various inter-slice thickness
git-bob
git-bob uses AI to solve Github-issues. It runs inside the Github CI, no need to install anything on your computer.
folktexts
Evaluate uncertainty, calibration, accuracy, and fairness of LLMs on real-world survey data!
openmc-regular-mesh-plotter
A Python package for plotting OpenMC regular mesh tally results with underlying geometry from neutronics simulations.
itwinai-plugin-template
Template for itwinai plugin, useful for use cases code to be included in the main library
connectors-template
A template repository for creating new Connectors to add Simvue tracking functionality to Non-Python simulations.
syncx
Official code repository for NeurIPS 2024 paper "Recurrent Complex-Weighted Autoencoders for Unsupervised Object Discovery"
redcap_custom_footer
Allows admins and project admins to add a custom footer to REDCap pages (surveys and/or project pages).
pgdrome
A FEniCS based python module of the Proper Generalized Decomposition (PGD) method.
hendrics
Shell scripts for spectral-timing analysis of X-ray astronomical data.
resnet50-sngw-hff
ResNet50 model to classify the high frequency emission in gravitational waves from core-collapse supernovae
p-orbital-qubit
Code repository for paper entitled "Proposed Five-Electron Charge Quadrupole Qubit" by John H. Caporaletti and J. P. Kestner
libsodium
For the love of all that is important to you, please do not use this fork of libsodium.
persons-names-mk
A database of Egyptian Middle Kingdom persons and names: technical documentation and source code
smirk
SMIRK is an experimental pedestrian emergency breaking ADAS facilitating research on quality assurance of critical components that rely on machine learning.
binning_wf
Pipeline to bin metagenomes into high-quality metagenomic-assembled genomes using DAGman and HTCondor.
bachduet-webgui
A Web Application for Baroque-style Human/Computer Musical Jamming.
aortafsi
An OpenFOAM's case to model a aorta using FSI-solids4foam and STL file with cfMesh.
visionproteleop
VisionOS App + Python Library to stream head / wrist / finger tracking data from Vision Pro to any robots.
gelureluinterpolation
Leveraging Continuously Differentiable Activation for Learning in Analog and Quantized Noisy Environments
pcfi
Per Class Feature Importance (PCFI): an explainability method for decision tree classifiers.
customsintaxdb
Given a list of species get sequences and complete taxonomic classification of a list of entries
demorepo
This repo is a demo which contains the core of what every repo should contain, a template. use https://github.com/OpenScienceMOOC/Module-5-Open-Research-Software-and-Open-Source/blob/master/content_development/Task_1.md for inspiration
precisetad
This is a read-only mirror of the git repos at https://bioconductor.org
appredict
Cardiac Action Potential Prediction (ApPredict) under drug-induced block of ion channels. This is a Chaste extension/bolt-on project.
bsprvse
Solve the (ro)vibrational Schödinger Equation with a basis of B-splines, optionally with a complex absorbing potential
parabolictroughcollectorbc
An OpenFOAM's boundary condition for wall of parabolic trough collector.