GitHub
doc_guidelines
A set of guidelines for documenting bioinformatics tools and workflows
https://github.com/fgittins/tricubic
A Python implementation of a tricubic interpolator in three dimensions.
studious-happiness
Previewing the Workbench version of Workflows with Python and Git
SNaQ
Julia package for the inference of semi-directed phylogenetic networks under pseudolikelihood model
https://github.com/fgittins/nonlinearsolve.jl
High-performance and differentiation-enabled nonlinear solvers (Newton methods), bracketed rootfinding (bisection, Falsi), with sparsity and Newton-Krylov support.
https://github.com/fgittins/scimlbenchmarks.jl
Scientific machine learning (SciML) benchmarks, AI for science, and (differential) equation solvers. Covers Julia, Python (PyTorch, Jax), MATLAB, R
web-visualization
The aim of this project is to develop a web interface for visualizing indexed documents, enriched by exploiting the semantic index
skyloc
Tools related to Sidereal (e.g., stars) or Solar System Objects (SSO) locator (e.g., apparent position and movements) for general purposes. Heavily influenced by the `kete` and SPICE tools.
https://github.com/fgittins/adventofcode2024.jl
My attempts at the Advent of Code 2024 in the Julia programming language.
nimplex
NIM simPLEX: A concise scientific Nim library (with CLI and Python binding) providing samplings, uniform grids, and traversal graphs in compositional (simplex) spaces.
drug-repurposing-datasets
Drug Repurposing Datasets for Collaborative Filtering Methods. Notebooks and code to generate datasets for collaborative filtering-based drug repurposing.
globus-serverless-portal
An example of a gateway built and distributed using Globus's serverless data portal template.
tfg
Creación de scripts para realizar pruebas con el sistema sensorial del coche autónomo
https://github.com/fgjeci/ubuntu-latex
It includes the details on how to compile latex files in Ubuntu
https://github.com/fgjeci/ns3-mmwave-millicar
The millicar - ORAN adopted ns3 module with ric-2 ip 10.0.3.0
nbbdd
BDD for Jupyter Notebooks. Hackday project at SSI Collaborations Workshop 2020. #CollabW2020
sifids
An Android app being developed as part of the Scottish Inshore Fisheries Integrated Data System (SIFIDS) Project
wt-ts-filler
Clean up time series of groundwater levels and fill in missing data using correlated time series from nearby wells.
zoinks
Command-line utility to return Zotero record field values given a Zotero select link, an item key, or even just a file attachment
t2t3_dataset_web_apps
A T2T3 presentation and workshop for building web applications with Dataset and CL Web Components
tfm-paper12-blackhole-singularity-evaporation
Time Field Model (TFM) codebase for black hole singularity avoidance and modified evaporation: HPC simulations, GW/shadow predictions, and Einstein Toolkit modifications.
https://github.com/fgjorup/plaid
plaid - plot azimuthally integrated data makes it easy to visualize powder diffraction data and compare with known structures (CIF)
cd19_splicing_mutagenesis
Cortés-López, Schulz, Enculescu et al. script repository
random-exponential
Generate pseudorandom numbers drawn from an exponential distribution.
magmeas
Python package to import magnetometry data and calculate extrinsic magnetic properties
numerical_geolab
Numerical Geolab codes and algorithms serve as a basic ingredient for the numerical developments of the CoQuake project.
online_bayesian_inference_etfa_2025
Bayesian PV power forecasting using pvlib and Pyro (for ETFA 2025)
mmrotate-ssood
This repository focuses on Semi-Supervised Oriented Object Detection
reproducible_research
Website for the Riffomonas Reproducible Research Tutorial Series
jcmathlib
Implementation of mathematical operations with big numbers and elliptic curve points for smart cards with JavaCard platform.
microview
A reporting tool for aggregating results from taxonomic classification analyses
ucvm
UCVM is used to query seismic velocity models for earth properties (Vp, Vs, density) by lat,long, and depth. It can create velocity meshes used in seismic wave propagation simulations. This repo contains the source codes that implement the core UCVM query interface. Python-based plotting modules are hosted in a separate GitHub repo.
