GitHub
predicate_learning
Code for paper "On Learning Scene-aware Generative State Abstractions for Task-level Mobile Manipulation Planning"
SODAR Core
SODAR Core: a Django-based framework for scientific data management and analysis web apps - Published in JOSS (2020)
cryosphere-links
This is a link list with awesome data, models, and tools around the cryosphere.
moldrug
moldrug (AKA mouse) is a Python package for drug-oriented optimization on the chemical space
@stdlib/stats-base-dists-chisquare-pdf
Chi-squared distribution probability density function (PDF).
@stdlib/stats-base-dists-binomial-pmf
Binomial distribution probability mass function (PMF).
json-to-usv
JavaScript Object Notation (JSON) to Unicode Separated Values (USV) Rust crate
neurodatapub
NeuroDataPub is an open-source neuroimaging dataset publication tool built on top of Datalad that helps NCCR-Synapsy members in the task of managing their dataset with Datalad and referencing them to the NCCR-SYNAPSY GitHub organization.
revisit-severson-et-al
Repository for the paper "Statistical learning for accurate and interpretable battery lifetime prediction"
https://github.com/firefly-cpp/uarmsolver
universal Association Rule Mining Solver
https://github.com/jcmcnch/easv-pipeline-for-515y-926r
This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools
pysbf2
Python library for parsing and generating Septentrio SBF GPS/GNSS protocol messages.
@stdlib/stats-base-dists-negative-binomial-pmf
Negative binomial distribution probability mass function (PMF).
AgentPy
AgentPy: A package for agent-based modeling in Python - Published in JOSS (2021)
nmrformd
NMRforMD is a python script for the calculation of NMR relaxation time T1 and T2 from molecular dynamics trajectory file.
scanneo2
Snakemake-based computational workflow for neoantigen prediction from diverse sources
lux-design-s1
Home to the design and engine of the @Lux-AI-Challenge Season 1, hosted on @kaggle
unsupervised_analysis
A general purpose Snakemake workflow and MrBiomics module to perform unsupervised analyses (dimensionality reduction & cluster analysis) and visualizations of high-dimensional data.
gepa
This repository contains the code for the EPA U.S. gridded methane greenhouse gas inventory (gridded GHGI)
delineator
Fast, accurate watershed delineation using hybrid vector- and raster-based methods and data from MERIT-Hydro
@stdlib/ndarray-base-assert-is-buffer-length-compatible
Determine if a buffer length is compatible with provided ndarray meta data.
PyBioPAX
PyBioPAX: biological pathway exchange in Python - Published in JOSS (2022)
greenexp_r
This is a R toolkit and developer version package to estimate multidimensional aspects of greenness and nature exposure, such as availability, accessibility and visibility using various geospatial data and models
https://github.com/althonos/torch-treecrf
A PyTorch implementation of Tree-structured Conditional Random Fields.
https://github.com/algebraicjulia/petri.jl
A Petri net modeling framework for the Julia programming language
usv-to-json
Unicode Separated Values (USV) to JavaScript Object Notation (JSON) Rust crate
syncopy
Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data
https://github.com/forieux/qmm
Python Quadratic Majorization-Minimization (MM) optimization algorithms of half-quadratic criteria. Inverses problems, image restoration, denoising, ...
pyGPGO
pyGPGO: Bayesian Optimization for Python - Published in JOSS (2017)
https://github.com/cosima/access-om2-1-025-010deg-report
Technical report detailing the ACCESS-OM2 coupled ice and ocean global model.
https://github.com/arjunsavel/scope
Simulating high-resolution cross-correlation spectroscopy of exoplanet atmospheres.
opcsim
opcsim is a python package for simulating low-cost optical particle sensors
https://github.com/cqcl/qnlp_lorenz_etal_2021_resources
Code and resources for the Lorenz et al. (2021) QNLP paper
https://github.com/chrisgrieser/nvim-chainsaw
Smart and highly customizable insertion of various kinds of log statements.
suanpan
🧮 An Open Source, Parallel and Heterogeneous Finite Element Analysis Framework
@stdlib/stats-base-dists-normal-pdf
Normal distribution probability density function (PDF).
opensourcepledge.com
We all depend on Open Source. Pay the maintainers by joining the Open Source Pledge.
https://github.com/boothgroup/momentgw
GW approximation and associated methods using moment-conserving Dyson equation solvers
ragoon
High level library for batched embeddings generation, blazingly-fast web-based RAG and quantized indexes processing ⚡
DearScholar
DearScholar: A mobile application to conduct qualitative and quantitative diary research - Published in JOSS (2020)