GitHub
gromacs-osc
Modifications to GROMACS 2021.5 to perform MD simulations in the presence of Ultrasounds
complex-contagion-model
Repository used for my Master Thesis at Potsdam Institute for Climate Impact Research, 2024/25.
https://github.com/emptymalei/torchdyn
A PyTorch library entirely dedicated to neural differential equations, implicit models and related numerical methods
mlpro-test-center
MLPro Test Center – Howtos and benchmarking tools for MLPro components and algorithms
mosquitosimcity_4cast
Code associated with the journal article "Mechanistic Modeling of Aedes aegypti Mosquito Habitats for Climate-informed Dengue Forecasting—Can We Improve Lead Time While Retaining Predictive Skill?"
gcdm-sbdd
A geometry-complete diffusion generative model (GCDM) for structure-based drug design (Nature CommsChem)
ecophysiology-of-two-mesophotic-octocorals-code-and-data
Publicly available code utilized in analyses for manuscript 'Ecophysiology of two mesophotic octocorals intended for restoration: Effects of light and temperature' (Lange et al, in review)
network_modeling
This project is my personal space to document learnings in complex systems. It's like a treasure chest filled with insights from online seminars and academic papers I've engaged with. 🎓
lujan_etal_2023_ua_osmose
Complete set of scripts used for the UA in NHCE OSMOSE model
dh-youtube-database
Database for a YouTube centered Research for a Political Science PhD
beamletoptics.jl
Optics simulation in Julia using geometrical and Gaussian beamlet tracing – simulate lasers, beam propagation, and simple optical systems.
activitywatch
The best free and open-source automated time tracker. Cross-platform, extensible, privacy-focused.
gcs-shape
gcs is a Python library for creating generalized cylindrical shells (GCS).
lilyfrogs
56 Lilypads is a turn-based game where frogs leap between lilypads to catch flies and lotuses, but each lilypad disappears once left behind! Compete for the highest score in this strategic battle before movement options run out
xtant-3_coupling_data
Two-temperature model (TTM) parameters (G, Ce, K) calculated with XTANT-3
math-base-special-nanminf
Return the minimum value of two single-precision floating-point numbers, ignoring NaN.
precisecaller
A complete, scalable, easy-to-use, open-source platform for genomic variant detection in Oncology and Precision Medicine
medio
medio is a library that enables input and output of mesh files for FreeFEM in .med format.
local-citation-recommendation
Code for ECIR 2022 paper Local Citation Recommendation with Hierarchical-Attention Text Encoder and SciBERT-based Reranking
https://github.com/compiler-campusminden/cb-vorlesung-bachelor-w25
Lecture "Compilerbau" (B.Sc.) (Winter 2025/26)
stats-strided-dstdevwd
Calculate the standard deviation of a double-precision floating-point strided array using Welford's algorithm.
code_spc_ecog_stn_speech
Sample code for: Spike-phase coupling of subthalamic neurons to posterior opercular cortex predicts speech sound accuracy
hsf-training-cms-analysis-webpage
Webpage for github.com/hsf-training/hsf-training-cms-analysis
self-supervised-learning-for-medical-image-analysis
Code for "Evaluating Self-Supervised Learning in Medical Imaging: A Benchmark for Robustness, Generalizability, and Multi-Domain Impact". BMVC, 2025.
gaunegf
Non-Equilibrium Green's Functions (NEGF) extension for the Gaussian software package using the gauopen Python interface
pyrddlgym
A toolkit for auto-generation of OpenAI Gym environments from RDDL description files.
summary-and-setup
Summary and setup lesson/episodes to do with getting learners ready for further lessons in the curriculum
IDEAS
Modelica library allowing simultaneous transient simulation of thermal and electrical systems at both building and feeder level.
drastic
The DRASTIC Index Calculator is a QGIS plugin designed to evaluate the potential pollution risk of groundwater in a specific area.
staphylores
Trabajo de Fin de Máster, Máster Universitario en Bioinformática, Universidad Europea de Madrid.
2025-06-25-tudelft
SWC Mix and Match Only Git Location: Eindhoven University of Technology .Date: June 25th, 2025
spanish-open-mobility-workshop-ic2s2-2025
Website for the "Mobility Flows and Accessibility Using R and Big Open Data" tutorial at IC2S2 2025 conference in Norrköping.
typed_cache
A robust, type-safe caching library for Ruby that makes cache interactions explicit and predictable.
stats-strided-stdevch
Calculate the standard deviation of a strided array using a one-pass trial mean algorithm.
magicbathynet
Quick start guide for benchmarking MagicBathyNet dataset in learning-based bathymetry and pixel-based classification using Remote Sensing imagery.
