GitHub
calligraph
Calligraph: A tool to interactively explore and visualise Calliope model results
herrcompbioinfo
HerrComp4Bioinfo: Un recurso educativo de código abierto de herramientas computacionales para entusiastas de la Bioinformátical/HerrComp4Bioinfo: An open-source educational resource of computational tools for Bioinformatics enthusiasts
slurm-cli-api-proxy-client
Mimics SLURM commands, translating them into SLURM REST API calls
cicognara-printers-marks
Printer's devices (or printer's marks) in the Cicognara collection
citizen-expert-snail-prediction
Code used for the paper: Great minds, map alike: Citizen and expert distribution models of schistosome snail hosts in rural west Uganda
irbp.jl
An efficient numerical algorithm for solving the Euclidean projection of a vector onto the nonconvex lp-ball in Julia. Inspired from https://github.com/Optimizater/Lp-ball-Projection
code-and-data-for-the-figures-of-nonlinearity-of-the-fidelity-in-open-qudit-systems
nfhaplotag
Nextflow pipeline for running haplotag software like WhatsHap or longphase
imsrg
In-Medium Similarity Renormalization Group software for nuclear structure calculations. Written in C++, with Python bindings.
mh1dmt
:earth_asia: MH1DMT is inversion software using LM (Levenberg-Marquardt), SVD (Singular Value Decomposition), SA (Simulated Annealing), VFSA (Very Fast Simulated Annealing), and MVFSA (Modified Very Fast Simulated Annealing) of one-dimension magnetotellurics (MT) in MATLAB
https://github.com/dcan-labs/exampleconfig
Example configuration for prototyping a Swipes for Science app
brain_representations
code repository for paper. "Comparing representations of high-dimensional data with persistent homology: a case study in neuroimaging"
g-adopt
Repository for the development of the Geoscientific ADjoint Optimization PlaTform (G-ADOPT).
esa-pyxel
Mirror/fork of ESA pyxel (https://gitlab.com/esa/pyxel) for personal development
quarto-codespaces
Quarto Codespaces / Dev Containers setup for quick online testing.
bacqc-ont
bacQC-ONT is a bioinformatics pipeline for the assessment of Oxford Nanopore sequence data
katagomo
KataGo (AlphaZero-like AI) for every board game. Gomoku&Renju(KataGomo), Hex(KataHex), and connect6, ataxx, breakthrough, tiaoqi, capture-go, nogo, and others
liver-model-manuscript
QSP model of liver lipid metabolism for 2022 publication.
n-qubit-nonlinear-protocol
We introduce a non-linear iterative quantum protocol, characterized by the sequential application of distinct unitary operators during its iterative steps which enables this protocol to effectively mitigate errors at a linear order. Furthermore, demonstrate a sub-exponential improvement in noise within an alternating GHZ distillation protocol.
gov.nasa.pds.registry-api:registry-api-model
Web API service for the PDS Registry, providing the implementation of the PDS Search API (https://github.com/nasa-pds/pds-api) for the PDS Registry.
threat-post-detection-gpt
JavaScript tool using HTTP requests & LLM to spot threats in online content.
cocoa
Kang, I., Zhang, Q., Yu, S.X. et al. Coordinate-based neural representations for computational adaptive optics in widefield microscopy. Nat Mach Intell 6, 714–725 (2024). https://doi.org/10.1038/s42256-024-00853-3
boilercv
Computer vision routines suitable for nucleate pool boiling bubble analysis
actor-critic-model-predictive-force-controller
Related paper: "Experimental Validation of an Actor-Critic Model Predictive Force Controller for Robot-Environment Interaction Tasks"
sparc-me
A python tool to explore, enhance, and expand SPARC datasets and their descriptions
extra-javascript-text
Utilities for processing JavaScript text.
qcml
A benchmarking library for quantum and classical machine learning, with specialized support for evaluating kernel methods.
flexi
FLEXI: A high order discontinuous Galerkin framework for hyperbolic–parabolic conservation laws
safe-control-gym
PyBullet CartPole and Quadrotor environments—with CasADi symbolic a priori dynamics—for learning-based control and RL
semantics-car-segmentation
Semantics segmentation of car parts like windows, wheels, etc
sabores_de_vida
Sabores de Vida: Guía Integral de Alimentación para la Tercera Edad
prime-issue-density
A tool to calculate the issue density of a Git repository by analyzing the issues of a project in its issue tracker
flame
[CVPR 2025] PyTorch implementation of paper "FLAME: Frozen Large Language Models Enable Data-Efficient Language-Image Pre-training"
to-thermallib
Modelo de taquiones oscuros aplicado a computación cuántica distribuida y simulación de gravedad cuántica
nasdaq-data-link-mcp-os
A Nasdaq Data Link MCP (Model Context Protocol) Server
draxor-ft-helper
DRAXOR FT HELPER - Forensic Platform developed by Anonymous S7 (Jay), founding member of the World Forensic Tool Team.
OptimalBranching
Automated discovery of optimal branching rules for the branch-and-bound algorithm
ebhi-seg
Enteroscope Biopsy Histopathological Hematoxylin and Eosin Image Dataset
osemosys_kenya_wesm
Repository to host the OSeMOSYS Kenya Whole Energy System Model (WESM)
heatoptconstr
Optimal reconstruction of the Neumann boundary condition for 1D Heat Equation, including both unconstrained and constrained formulations of the problem.
https://github.com/bmaitner/community_ecology_course
Content for a Community Ecology course
constanttermsequences
A Sage library implementing functions manipulating and computing with Constant Term Sequences
explainai
Open-source framework for visual explanation of transformer-based neural networks