GitHub
a-stochastic-landscape-approach-for-protein-folding-state-classification
A shared MATLAB-based open-source of the stochastic landscape approach for protein folding state classification.
needhamschoreder_automated_analysis
Theoretical and practical introduction to the Tamarin Prover through a real-world case study on the Needham Schroeder protocol
stelr
STELR is Snakemake-enabled bioinformatics system for detecting transposable elements in long read sequencing data.
ppl-cc-ti1-2024-1-g-times-para-jogos
ti-1-ppl-cc-m-20241-1-times-para-jogos created by GitHub Classroom
readczi
readCzi is an R package to read Carl Zeiss Image (CZI) files, convert them to tifs and store metadata
zeroi2v
[ECCV 2024] ZeroI2V: Zero-Cost Adaptation of Pre-trained Transformers from Image to Video
geometric-dynamic-movement-primitives
A novel DMP architecture based on path-speed separation
pgopt
Particle Gibbs-based optimal control with performance guarantees for unknown systems with latent states
fern
A human-readable and modifiable data-expression language with minimal clutter.
IndividualDisplacements.jl
IndividualDisplacements.jl: a Julia package to simulate and study particle displacements within the climate system - Published in JOSS (2021)
POMDPStressTesting.jl
POMDPStressTesting.jl: Adaptive Stress Testing for Black-Box Systems - Published in JOSS (2021)
RivGraph
RivGraph: Automatic extraction and analysis of river and delta channel network topology - Published in JOSS (2021)
MiTfAT
MiTfAT: A Python-based Analysis Tool for Molecular fMRI Experiments. - Published in JOSS (2021)
Multiscale Solar Water Heating
Multiscale Solar Water Heating - Published in JOSS (2020)
ocean_data_tools
ocean_data_tools: A MATLAB toolbox for interacting with bulk freely-available oceanographic data - Published in JOSS (2020)
Peacock.jl
Peacock.jl: Photonic crystals in Julia - Published in JOSS (2020)
https://github.com/erictleung/tables
Convert various delimited text files to LaTeX tables
pmv-ads-2024-1-e5-proj-empext-t2-fermaloc
pmv-ads-2024-1-e5-proj-fermaloc-t2 created by GitHub Classroom
CPgeneProfiler
CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies - Published in JOSS (2020)
emba
emba: R package for analysis and visualization of biomarkers in boolean model ensembles - Published in JOSS (2020)
A parallel global multiobjective framework for optimization
A parallel global multiobjective framework for optimization: pagmo - Published in JOSS (2020)
qMRLab
qMRLab: Quantitative MRI analysis, under one umbrella - Published in JOSS (2020)
CapacityExpansion
CapacityExpansion: A capacity expansion modeling framework in Julia - Published in JOSS (2020)
MTEX2Gmsh
MTEX2Gmsh: a tool for generating 2D meshes from EBSD data - Published in JOSS (2020)
https://github.com/erictleung/talk-unittest-travis-ci
Presentation on Python's unittest and Travis CI
dcgp
dcgp: Differentiable Cartesian Genetic Programming made easy. - Published in JOSS (2020)
https://github.com/erictleung/job-search-visualization
A data visualization of my job search in 2021
COVID-19 Data Hub
COVID-19 Data Hub - Published in JOSS (2020)
FLAM
FLAM: Fast Linear Algebra in MATLAB - Algorithms for Hierarchical Matrices - Published in JOSS (2020)
https://github.com/erictleung/how-to-learn-to-code
https://github.com/erictleung/emacs-lisp-deliberate-practice
Deliberate Practice for Learning Emacs Lisp
https://github.com/erictleung/tidytuesdays
:chart_with_upwards_trend: My attempts at #tidytuesday
rca
The Code for the runtime tests for the Paper "Rescue Craft Allocation in Tidal Waters of the North and Baltic Sea"
pybeach
pybeach: A Python package for extracting the location of dune toes on beach profile transects - Published in JOSS (2019)
https://github.com/erictleung/simplewriter
Vim plugin script to color words that are not simple like in http://xkcd.com/simplewriter/
momepy
momepy: Urban Morphology Measuring Toolkit - Published in JOSS (2019)
PressureDrop.jl
PressureDrop.jl: Pressure traverses and gas lift analysis for oil & gas wells - Published in JOSS (2019)
https://github.com/cornell-zhang/hisparse
High-Performance Sparse Linear Algebra on HBM-Equipped FPGAs Using HLS
RAFF.jl
RAFF.jl: Robust Algebraic Fitting Function in Julia - Published in JOSS (2019)
Optimising Light Source Positioning for Even and Flux-Efficient Illumination
Optimising Light Source Positioning for Even and Flux-Efficient Illumination - Published in JOSS (2019)
hotsub
hotsub: A batch job engine for cloud services with ETL framework - Published in JOSS (2018)
survxai
survxai: an R package for structure-agnostic explanations of survival models - Published in JOSS (2018)
bem
bem: modeling for neutron Bragg-edge imaging - Published in JOSS (2018)
GrainSizeTools
GrainSizeTools: a Python script for grain size analysis and paleopiezometry based on grain size - Published in JOSS (2018)
GEM
GEM: A Python package for graph embedding methods - Published in JOSS (2018)
Combining a Probability and a Non-Probability Sample in a Capture-Recapture Setting
Combining a Probability and a Non-Probability Sample in a Capture-Recapture Setting - Published in JOSS (2018)
Limbo
Limbo: A Flexible High-performance Library for Gaussian Processes modeling and Data-Efficient Optimization - Published in JOSS (2018)
CLIMLAB
CLIMLAB: a Python toolkit for interactive, process-oriented climate modeling - Published in JOSS (2018)
TSrepr R package
TSrepr R package: Time Series Representations - Published in JOSS (2018)
Gramm
Gramm: grammar of graphics plotting in Matlab - Published in JOSS (2018)
GIBBON
GIBBON: The Geometry and Image-Based Bioengineering add-On - Published in JOSS (2018)
Mosquitto
Mosquitto: server and client implementation of the MQTT protocol - Published in JOSS (2017)
hddtools
hddtools: Hydrological Data Discovery Tools - Published in JOSS (2017)
greenlight-gym2
Reinforcement learning environment for controlling greenhouse crop production systems. The greenhouse dynamics are based on GreenLight..
differential-equations
A high-performance library for numerically solving differential equations in Rust
robot_remote_control
A library for framework independent remote control of semi-autonomous robots. The library is in active development and might change a lot.
mini-callcenter-simulator
Mini Callcenter Simulator simulates a call center and takes into account many parameters not covered by the Erlang C formula.
cumulative-effect-of-orbital-resonances-in-emris
Mathematica scripts used to produce the results presented in 2502.20457.
my_distiller
my distillation runner based on mmcls
mzkit
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
nonspectral-hummingbird-vision
Code and data for "Wild hummingbirds discriminate nonspectral colors"
occupations-qualtrics
An implementation of select2 to capture occupations using Canadian NOC codes in Qualtrics
cosma
Cosma is a document graph visualization tool. It modelizes interlinked Markdown files and renders them as an interactive network in a web interface.
ultralytics
Ultralytics YOLO11
environment-geodatabase
Repository to automate the building and sharing of GIS data using Docker, OGC standards and PostGIS tools.
gnom
GNOM v2: An optimized steady-state model of the modern global marine neodymium cycle